C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172292-ENSG00000163072 CGP 9606 2:168455862-168865514
GeneTranscriptPositionBiotype
ENSG00000152253 (SPC25)
SPC25, NDC80 kinetochore complex component 		ENST00000282074 (SPC25-001) 168870894-168890445 protein_coding
ENST00000451987 (SPC25-004) 168877238-168913277 protein_coding
ENST00000472216 (SPC25-003) 168877238-168913371 processed_transcript
ENST00000479309 (SPC25-002) 168834132-168889293 processed_transcript
ENSG00000163072 (NOSTRIN)
nitric oxide synthase trafficking 		ENST00000317647 (NOSTRIN-001) 168802418-168865514 protein_coding
ENST00000397206 (NOSTRIN-012) 168802636-168864970 protein_coding
ENST00000397209 (NOSTRIN-004) 168802647-168864970 protein_coding
ENST00000427068 (NOSTRIN-008) 168855422-168859533 nonsense_mediated_decay
ENST00000439509 (NOSTRIN-011) 168802592-168831533 nonsense_mediated_decay
ENST00000444448 (NOSTRIN-201) 168798151-168865339 protein_coding
ENST00000445023 (NOSTRIN-003) 168802597-168865054 protein_coding
ENST00000447264 (NOSTRIN-007) 168811334-168851182 protein_coding
ENST00000458381 (NOSTRIN-002) 168786539-168865055 protein_coding
ENST00000471833 (NOSTRIN-006) 168802639-168812084 retained_intron
ENST00000472260 (NOSTRIN-005) 168855686-168865054 retained_intron
ENST00000486873 (NOSTRIN-010) 168843052-168855654 retained_intron
ENST00000495202 (NOSTRIN-009) 168859109-168860838 retained_intron
ENSG00000172292 (CERS6)
ceramide synthase 6 		ENST00000305747 (CERS6-001) 168455862-168775137 protein_coding
ENST00000392687 (CERS6-002) 168456249-168775134 protein_coding
ENSG00000199348 (RNU6-766P)
RNA, U6 small nuclear 766, pseudogene 		ENST00000362478 (RNU6-766P-201) 168606390-168606496 snRNA
ENSG00000227617 (CERS6-AS1)
CERS6 antisense RNA 1 		ENST00000425636 (CERS6-AS1-001) 168771953-168786429 antisense
ENST00000594898 (CERS6-AS1-005) 168783139-168786429 antisense
ENST00000594941 (CERS6-AS1-006) 168774355-168786397 antisense
ENST00000599361 (CERS6-AS1-002) 168774399-168786428 antisense
ENST00000599755 (CERS6-AS1-003) 168774821-168786429 antisense
ENST00000600693 (CERS6-AS1-004) 168774398-168784788 antisense
ENST00000607993 (CERS6-AS1-009) 168774449-168786961 antisense
ENST00000609665 (CERS6-AS1-008) 168774360-168786435 antisense
ENST00000609766 (CERS6-AS1-007) 168774419-168786429 antisense
ENST00000614990 (CERS6-AS1-010) 168774450-168786429 retained_intron
CIL_00063C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027035-ENSMUSG00000034738 CGP 10090 2:68861441-69189330
GeneTranscriptPositionBiotype
ENSMUSG00000027035 (Cers6)
ceramide synthase 6 		ENSMUST00000028426 (Cers6-001) 68861441-69114282 protein_coding
ENSMUST00000141498 (Cers6-003) 68959911-69051328 retained_intron
ENSMUST00000141983 (Cers6-002) 68861470-68934851 retained_intron
ENSMUST00000155748 (Cers6-004) 68947260-69050972 retained_intron
ENSMUST00000175684 (Cers6-005) 68861450-69071541 retained_intron
ENSMUST00000176018 (Cers6-006) 68861586-69108644 protein_coding
ENSMUST00000183755 (Cers6-007) 68861442-68862724 retained_intron
ENSMUSG00000034738 (Nostrin)
nitric oxide synthase trafficker 		ENSMUST00000041865 (Nostrin-001) 69135800-69189330 protein_coding
ENSMUST00000141276 (Nostrin-002) 69179305-69185548 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063C_0001ENSG00000152253ENST00000282074ENST00000451987ENST00000472216ENST00000479309ENSG00000163072ENST00000317647ENST00000397206ENST00000397209ENST00000427068ENST00000439509ENST00000444448ENST00000445023ENST00000447264ENST00000458381ENST00000471833ENST00000472260ENST00000486873ENST00000495202ENSG00000172292ENST00000305747ENST00000392687ENSG00000199348ENST00000362478ENSG00000227617ENST00000425636ENST00000594898ENST00000594941ENST00000599361ENST00000599755ENST00000600693ENST00000607993ENST00000609665ENST00000609766ENST00000614990CIL_00063C_0002ENSMUSG00000027035ENSMUST00000028426ENSMUST00000141498ENSMUST00000141983ENSMUST00000155748ENSMUST00000175684ENSMUST00000176018ENSMUST00000183755ENSMUSG00000034738ENSMUST00000041865ENSMUST00000141276
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063C_0001ENSG00000152253ENST00000282074ENST00000451987ENST00000479309ENSG00000163072ENST00000317647ENST00000397206ENST00000397209ENST00000445023ENST00000447264ENST00000472260ENST00000486873ENSG00000172292ENST00000305747ENST00000392687ENSG00000199348ENST00000362478ENSG00000227617ENST00000425636CIL_00063C_0002ENSMUSG00000027035ENSMUST00000028426ENSMUST00000141983ENSMUST00000175684ENSMUST00000176018ENSMUST00000183755ENSMUSG00000034738ENSMUST00000041865ENSMUST00000141276
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152253 ENST00000282074 0.115±0.00 0.321±0.00 0.108±0.00 0.300±0.00 0.741±0.01 0.245±0.01 0.081±0.00 0.130±0.00 0.052±0.02 0.243±0.12 0.014±0.00 6.092±6.06 2.302±1.05 2.687±0.76
ENST00000451987 N/A N/A N/A 0.931±0.00 N/A N/A N/A N/A 0.124±0.00 N/A 0.084±0.00 N/A N/A N/A
ENST00000472216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479309 0.171±0.00 N/A N/A 0.340±0.00 N/A N/A N/A 0.556±0.00 N/A 0.181±0.00 N/A N/A N/A 1.665±0.00
ENSG00000163072 ENST00000317647 N/A N/A 1.010±0.00 N/A N/A 2.146±0.00 0.514±0.00 N/A 0.285±0.00 2.362±0.00 N/A 1.363±0.73 2.602±0.00 2.807±0.00
ENST00000397206 2.639±0.00 N/A 1.252±0.00 1.274±0.49 N/A 2.228±0.00 N/A 3.031±0.00 N/A 6.194±0.82 1.303±0.00 2.271±0.68 N/A N/A
ENST00000397209 7.665±0.00 5.135±0.00 N/A N/A 4.702±2.56 2.706±0.00 1.559±0.74 2.521±1.93 0.905±0.02 5.024±0.94 N/A 1.194±0.00 N/A 8.175±0.00
ENST00000427068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445023 4.026±0.00 3.387±0.00 N/A 0.802±0.00 3.697±1.95 4.389±0.00 3.846±0.00 5.947±0.00 2.226±0.00 9.092±0.00 N/A 2.371±0.55 6.803±2.42 5.243±1.29
ENST00000447264 N/A N/A 1.851±0.00 N/A 5.018±0.00 2.029±0.00 0.707±0.00 0.979±0.00 1.242±0.00 N/A N/A 2.581±0.00 6.447±0.00 N/A
ENST00000458381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472260 N/A 2.155±0.00 N/A N/A 3.897±0.00 1.385±0.04 N/A N/A 0.564±0.00 N/A N/A 2.419±1.24 N/A 4.312±0.00
ENST00000486873 N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A N/A N/A N/A N/A
ENST00000495202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172292 ENST00000305747 3.298±0.00 0.395±0.00 1.114±0.00 N/A 1.942±0.12 3.996±0.99 N/A 2.017±0.69 1.360±0.53 1.248±0.26 N/A 3.336±1.15 1.293±0.26 3.088±0.80
ENST00000392687 N/A 0.495±0.00 0.471±0.00 3.163±1.14 0.745±0.00 N/A 7.273±3.15 N/A 0.937±0.23 0.605±0.00 0.725±0.03 N/A 0.697±0.00 N/A
ENSG00000199348 ENST00000362478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.748±0.00
ENSG00000227617 ENST00000425636 N/A N/A 1.325±0.00 N/A 3.039±0.00 2.890±0.00 N/A 2.829±0.00 3.159±0.00 2.118±0.84 0.539±0.00 8.600±0.20 3.711±0.00 4.928±0.00
ENST00000594898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027035 ENSMUST00000028426 3.247±0.34 0.947±0.22 7.250±0.41 9.974±1.72 1.742±0.46 12.146±3.35 0.521±0.15 6.560±0.57 2.533±0.89 5.678±0.72 0.094±0.02 5.937±3.71 4.617±1.23 0.948±0.42
ENSMUST00000141498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141983 N/A 1.423±0.32 N/A N/A 3.789±0.41 16.240±2.91 N/A N/A 3.072±0.00 N/A N/A 10.982±2.54 N/A N/A
ENSMUST00000155748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.199±0.00
ENSMUST00000176018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.098±0.00
ENSMUST00000183755 N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034738 ENSMUST00000041865 0.356±0.11 0.320±0.22 2.276±0.14 0.654±0.67 0.303±0.16 2.863±1.17 0.765±0.02 0.365±0.19 2.929±0.96 6.044±2.14 0.174±0.09 1.222±1.41 28.167±13.49 0.098±0.08
ENSMUST00000141276 0.535±0.11 0.303±0.11 N/A 1.444±0.00 0.326±0.19 2.137±0.46 N/A 0.323±0.13 0.993±0.00 4.684±1.51 N/A 0.729±0.95 23.817±2.80 0.096±0.05

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