C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitric oxide synthase trafficking
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397209 NOSTRIN-004 ENSG00000163072 9606 + 2:168802647-168864970 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENST00000397209
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000397209 7.665±0.00 5.135±0.00 4.702±2.56 2.706±0.00 1.559±0.74 2.521±1.93 0.905±0.02 5.024±0.94 1.194±0.00 8.175±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063C CIL_00063C_0001 CGP 2:168455862-168865514
CIL_000639 CIL_000639_0001 CGP 2:168786539-168913371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0006897 IEA endocytosis
GO:0007165 IEA signal transduction
GO:0030666 TAS endocytic vesicle membrane
GO:0044281 TAS small molecule metabolic process
GO:0046209 TAS nitric oxide metabolic process
GO:0050999 IEA:TAS regulation of nitric-oxide synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041865 Nostrin-001 protein_coding Mus_musculus 0 1347
ENSMUST00000141276 Nostrin-002 processed_transcript Mus_musculus 0 448

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