C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041954 Commd2-002 ENSMUSG00000036513 10090 - 3:57646359-57651708 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041954 12.554±1.75 8.232±1.41 14.522±4.64 13.033±7.89 10.539±3.21 6.425±1.56 5.615±0.25 11.962±1.41 9.988±3.49 10.915±1.09 5.996±0.91 11.799±3.90 19.979±9.43 3.871±1.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R8 CIL_0002R8_0002 CGP 3:57455649-57651715
CIL_0002R7 CIL_0002R7_0002 CGP 3:57642904-57692537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000463077 COMMD2-007 retained_intron Homo_sapiens 0 405
ENST00000469896 COMMD2-003 retained_intron Homo_sapiens 0 217
ENST00000473414 COMMD2-001 protein_coding Homo_sapiens 0 405
ENST00000483146 COMMD2-008 retained_intron Homo_sapiens 3e-22 110
ENST00000483708 COMMD2-006 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000491617 COMMD2-005 nonsense_mediated_decay Homo_sapiens 0 217

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