C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473414 COMMD2-001 ENSG00000114744 9606 - 3:149738470-149752499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000473414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000473414 3.576±0.00 4.752±0.00 1.722±0.00 3.028±0.23 2.594±0.28 1.217±0.14 1.328±0.24 2.405±1.25 1.697±0.44 3.263±0.15 0.704±0.46 3.889±1.26 4.059±0.76 3.533±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R8 CIL_0002R8_0001 CGP 3:149517235-149752499
CIL_0002R7 CIL_0002R7_0001 CGP 3:149738470-149968385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160959 Commd2-001 protein_coding Mus_musculus 0 693
ENSMUST00000117232 Gm8216-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000041954 Commd2-002 nonsense_mediated_decay Mus_musculus 0 405
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000001 60

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