C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin XVI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042103 Myo16-201 ENSMUSG00000039057 10090 + 8:10272572-10634741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042103
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042103 0.013±0.01 0.009±0.00 3.683±1.84 0.130±0.03 0.112±0.03 0.004±0.00 0.024±0.01 0.011±0.00 0.109±0.03 0.013±0.01 0.090±0.02 0.052±0.06 0.109±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077M CIL_00077M_0002 CGP 8:10006843-10634741
CIL_00010K CIL_00010K_0002 CGP 8:10272572-11008458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005654 ISS nucleoplasm
GO:0005737 ISS cytoplasm
GO:0005829 IEA cytosol
GO:0005886 ISS plasma membrane
GO:0008152 IEA metabolic process
GO:0008285 ISS negative regulation of cell proliferation
GO:0014065 IDA phosphatidylinositol 3-kinase signaling
GO:0016020 IEA membrane
GO:0016459 IEA myosin complex
GO:0019903 IEA protein phosphatase binding
GO:0021549 ISS cerebellum development
GO:0032403 IEA protein complex binding
GO:0048471 ISS perinuclear region of cytoplasm
GO:0048812 IDA neuron projection morphogenesis
GO:0051015 ISS actin filament binding
GO:2000134 ISS negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251041 MYO16-002 protein_coding Homo_sapiens 0 2154
ENST00000356711 MYO16-201 protein_coding Homo_sapiens 0 2968
ENST00000357550 MYO16-001 protein_coding Homo_sapiens 0 2968
ENST00000457511 MYO16-202 protein_coding Homo_sapiens 0 2968

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