C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00010K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000041515-ENSG00000185950 CGP 9606 13:108596152-109786568
GeneTranscriptPositionBiotype
ENSG00000041515 (MYO16)
myosin XVI
ENST00000251041 (MYO16-002) 108665883-109048982 protein_coding
ENST00000356711 (MYO16-201) 108596152-109208007 protein_coding
ENST00000357550 (MYO16-001) 108665883-109207997 protein_coding
ENST00000375857 (MYO16-003) 108793580-109056057 retained_intron
ENST00000457511 (MYO16-202) 108629223-109208007 protein_coding
ENST00000467639 (MYO16-004) 108779542-108785740 processed_transcript
ENST00000482793 (MYO16-005) 108855296-108888477 processed_transcript
ENSG00000185950 (IRS2)
insulin receptor substrate 2
ENST00000375856 (IRS2-001) 109752698-109786568 protein_coding
ENSG00000223617 (LINC00370)
long intergenic non-protein coding RNA 370
ENST00000455487 (LINC00370-001) 109281973-109287733 lincRNA
ENSG00000229792 (LINC00399)
long intergenic non-protein coding RNA 399
ENST00000439008 (LINC00399-001) 109400696-109401641 lincRNA
ENSG00000229938 (MYO16-AS2)
MYO16 antisense RNA 2
ENST00000412809 (MYO16-AS2-001) 109101261-109101919 antisense
ENSG00000234854 (LINC00676)
long intergenic non-protein coding RNA 676
ENST00000416090 (LINC00676-001) 109728282-109730007 antisense
ENSG00000236053 (LINC01067)
long intergenic non-protein coding RNA 1067
ENST00000432575 (LINC01067-001) 109310135-109311773 lincRNA
ENSG00000236242 (MYO16-AS1)
MYO16 antisense RNA 1
ENST00000439299 (MYO16-AS1-001) 109163902-109201483 antisense
ENSG00000275216 (RP11-54H7.4)
ENST00000618966 (RP11-54H7.4-001) 109269634-109273838 lincRNA
CIL_00010K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039057-ENSMUSG00000038894 CGP 10090 8:10272572-11008458
GeneTranscriptPositionBiotype
ENSMUSG00000038894 (Irs2)
insulin receptor substrate 2
ENSMUST00000040514 (Irs2-201) 10986980-11008458 protein_coding
ENSMUSG00000038917 (3930402G23Rik)
RIKEN cDNA 3930402G23 gene
ENSMUST00000040608 (3930402G23Rik-001) 10924427-10928457 lincRNA
ENSMUSG00000039057 (Myo16)
myosin XVI
ENSMUST00000042103 (Myo16-201) 10272572-10634741 protein_coding
ENSMUSG00000096258 (Rps16-ps3)
ribosomal protein S16, pseudogene 3
ENSMUST00000179126 (Rps16-ps3-201) 10808730-10809170 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010K_0001ENSG00000041515ENST00000251041ENST00000356711ENST00000357550ENST00000375857ENST00000457511ENST00000467639ENST00000482793ENSG00000185950ENST00000375856ENSG00000223617ENST00000455487ENSG00000229792ENST00000439008ENSG00000229938ENST00000412809ENSG00000234854ENST00000416090ENSG00000236053ENST00000432575ENSG00000236242ENST00000439299ENSG00000275216ENST00000618966CIL_00010K_0002ENSMUSG00000038894ENSMUST00000040514ENSMUSG00000038917ENSMUST00000040608ENSMUSG00000039057ENSMUST00000042103ENSMUSG00000096258ENSMUST00000179126
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010K_0001ENSG00000041515ENST00000251041ENST00000357550ENST00000375857ENST00000457511ENST00000482793ENSG00000185950ENST00000375856ENSG00000223617ENST00000455487ENSG00000229792ENST00000439008ENSG00000229938ENST00000412809ENSG00000234854ENST00000416090ENSG00000236053ENST00000432575ENSG00000236242ENST00000439299ENSG00000275216ENST00000618966CIL_00010K_0002ENSMUSG00000038894ENSMUST00000040514ENSMUSG00000038917ENSMUST00000040608ENSMUSG00000039057ENSMUST00000042103ENSMUSG00000096258ENSMUST00000179126
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000041515 ENST00000251041 N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357550 0.158±0.00 0.131±0.00 0.032±0.00 1.528±0.00 0.723±0.68 N/A 0.009±0.00 0.091±0.05 N/A 0.088±0.06 N/A 0.026±0.02 0.047±0.00 N/A
ENST00000375857 N/A N/A N/A N/A N/A 0.087±0.00 0.017±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A
ENST00000457511 N/A N/A N/A 0.624±0.35 0.068±0.00 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482793 N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 N/A N/A N/A N/A N/A
ENSG00000185950 ENST00000375856 27.605±0.00 1.299±0.00 0.948±0.00 10.820±7.99 11.513±6.81 6.676±6.15 7.831±7.38 3.088±0.41 3.513±2.41 2.664±2.07 9.997±8.12 5.145±2.11 10.989±3.80 2.980±2.02
ENSG00000223617 ENST00000455487 0.036±0.00 N/A N/A N/A N/A 0.329±0.00 0.182±0.00 N/A N/A N/A 0.298±0.00 N/A 0.077±0.00 N/A
ENSG00000229792 ENST00000439008 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.10
ENSG00000229938 ENST00000412809 N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.771±0.00
ENSG00000234854 ENST00000416090 N/A N/A N/A 0.037±0.00 N/A 0.874±0.00 N/A N/A N/A 0.538±0.00 N/A N/A N/A 0.031±0.00
ENSG00000236053 ENST00000432575 0.555±0.00 1.425±0.00 N/A 0.556±0.00 0.565±0.21 0.285±0.17 0.045±0.00 0.742±0.00 1.270±0.00 0.778±0.00 0.041±0.00 0.347±0.14 0.143±0.01 0.762±0.33
ENSG00000236242 ENST00000439299 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.366±0.21 N/A 0.150±0.00 0.354±0.12 0.025±0.00
ENSG00000275216 ENST00000618966 0.442±0.00 1.469±0.00 0.182±0.00 3.384±0.00 0.348±0.24 0.237±0.07 0.182±0.12 0.604±0.53 0.358±0.32 0.180±0.00 0.134±0.00 0.620±0.78 2.307±2.32 1.744±1.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038894 ENSMUST00000040514 0.537±0.04 6.686±2.14 N/A 1.933±0.15 5.621±3.55 7.024±3.17 1.502±0.28 2.761±1.70 1.319±0.71 6.143±1.35 2.245±0.17 5.717±1.92 11.399±6.65 0.676±0.45
ENSMUSG00000038917 ENSMUST00000040608 0.140±0.04 0.047±0.02 0.073±0.06 0.054±0.01 0.104±0.05 0.212±0.13 0.016±0.01 0.051±0.03 2.736±5.62 0.248±0.11 0.019±0.01 0.129±0.11 0.357±0.38 0.052±0.03
ENSMUSG00000039057 ENSMUST00000042103 0.013±0.01 0.009±0.00 N/A 3.683±1.84 0.130±0.03 0.112±0.03 0.004±0.00 0.024±0.01 0.011±0.00 0.109±0.03 0.013±0.01 0.090±0.02 0.052±0.06 0.109±0.08
ENSMUSG00000096258 ENSMUST00000179126 N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A

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