C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00077M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102524-ENSG00000041515 CGP 9606 13:108251240-109208007
GeneTranscriptPositionBiotype
ENSG00000041515 (MYO16)
myosin XVI 		ENST00000251041 (MYO16-002) 108665883-109048982 protein_coding
ENST00000356711 (MYO16-201) 108596152-109208007 protein_coding
ENST00000357550 (MYO16-001) 108665883-109207997 protein_coding
ENST00000375857 (MYO16-003) 108793580-109056057 retained_intron
ENST00000457511 (MYO16-202) 108629223-109208007 protein_coding
ENST00000467639 (MYO16-004) 108779542-108785740 processed_transcript
ENST00000482793 (MYO16-005) 108855296-108888477 processed_transcript
ENSG00000102524 (TNFSF13B)
tumor necrosis factor (ligand) superfamily, member 13b 		ENST00000375887 (TNFSF13B-001) 108269718-108308484 protein_coding
ENST00000430559 (TNFSF13B-201) 108269629-108308484 protein_coding
ENST00000479435 (TNFSF13B-002) 108270227-108303604 processed_transcript
ENST00000486502 (TNFSF13B-003) 108251240-108270417 processed_transcript
ENST00000493765 (TNFSF13B-004) 108303306-108307033 processed_transcript
ENST00000542136 (TNFSF13B-202) 108269896-108303467 protein_coding
ENSG00000223177 (RNA5SP39)
RNA, 5S ribosomal pseudogene 39 		ENST00000411245 (RNA5SP39-201) 108301212-108301331 rRNA
ENSG00000229938 (MYO16-AS2)
MYO16 antisense RNA 2 		ENST00000412809 (MYO16-AS2-001) 109101261-109101919 antisense
ENSG00000232087 (HCFC2P1)
host cell factor C2 pseudogene 1 		ENST00000392864 (HCFC2P1-001) 108480226-108481817 processed_pseudogene
ENSG00000236242 (MYO16-AS1)
MYO16 antisense RNA 1 		ENST00000439299 (MYO16-AS1-001) 109163902-109201483 antisense
ENSG00000277246 (RP11-153I24.4)
 ENST00000619612 (RP11-153I24.4-001) 108267320-108267734 sense_intronic
CIL_00077M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031497-ENSMUSG00000039057 CGP 10090 8:10006843-10634741
GeneTranscriptPositionBiotype
ENSMUSG00000031497 (Tnfsf13b)
tumor necrosis factor (ligand) superfamily, member 13b 		ENSMUST00000033892 (Tnfsf13b-201) 10006843-10035441 protein_coding
ENSMUSG00000039057 (Myo16)
myosin XVI 		ENSMUST00000042103 (Myo16-201) 10272572-10634741 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077M_0001ENSG00000041515ENST00000251041ENST00000356711ENST00000357550ENST00000375857ENST00000457511ENST00000467639ENST00000482793ENSG00000102524ENST00000375887ENST00000430559ENST00000479435ENST00000486502ENST00000493765ENST00000542136ENSG00000223177ENST00000411245ENSG00000229938ENST00000412809ENSG00000232087ENST00000392864ENSG00000236242ENST00000439299ENSG00000277246ENST00000619612CIL_00077M_0002ENSMUSG00000031497ENSMUST00000033892ENSMUSG00000039057ENSMUST00000042103
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077M_0001ENSG00000041515ENST00000251041ENST00000357550ENST00000375857ENST00000457511ENST00000482793ENSG00000102524ENST00000375887ENST00000430559ENST00000486502ENST00000493765ENST00000542136ENSG00000223177ENST00000411245ENSG00000229938ENST00000412809ENSG00000232087ENST00000392864ENSG00000236242ENST00000439299ENSG00000277246ENST00000619612CIL_00077M_0002ENSMUSG00000031497ENSMUST00000033892ENSMUSG00000039057ENSMUST00000042103
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000041515 ENST00000251041 N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357550 0.158±0.00 0.131±0.00 0.032±0.00 1.528±0.00 0.723±0.68 N/A 0.009±0.00 0.091±0.05 N/A 0.088±0.06 N/A 0.026±0.02 0.047±0.00 N/A
ENST00000375857 N/A N/A N/A N/A N/A 0.087±0.00 0.017±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A
ENST00000457511 N/A N/A N/A 0.624±0.35 0.068±0.00 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482793 N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 N/A N/A N/A N/A N/A
ENSG00000102524 ENST00000375887 1.195±0.00 2.058±0.00 0.088±0.00 0.485±0.23 0.879±0.00 0.590±0.00 0.575±0.31 0.466±0.00 0.596±0.00 1.041±0.36 N/A 0.394±0.26 1.119±0.46 0.537±0.41
ENST00000430559 N/A 0.634±0.00 N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A 0.154±0.00 0.435±0.29 N/A
ENST00000479435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486502 N/A N/A N/A N/A N/A N/A N/A 1.666±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493765 N/A N/A N/A 1.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00
ENST00000542136 N/A N/A N/A N/A N/A N/A 0.973±0.00 2.146±0.00 N/A 4.129±0.00 N/A 1.316±0.00 2.923±0.00 0.327±0.00
ENSG00000223177 ENST00000411245 N/A N/A N/A N/A N/A N/A 0.172±0.00 0.188±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000229938 ENST00000412809 N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.771±0.00
ENSG00000232087 ENST00000392864 N/A N/A N/A 0.006±0.00 N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236242 ENST00000439299 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.366±0.21 N/A 0.150±0.00 0.354±0.12 0.025±0.00
ENSG00000277246 ENST00000619612 N/A 0.214±0.00 0.378±0.00 0.053±0.00 N/A 0.261±0.00 0.054±0.00 0.702±0.52 0.169±0.00 0.217±0.00 N/A 0.128±0.04 0.050±0.00 0.036±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031497 ENSMUST00000033892 2.455±0.97 3.230±0.40 3.891±0.79 0.171±0.10 3.609±2.26 6.050±0.90 0.641±0.24 1.212±0.16 0.111±0.04 14.591±2.36 0.201±0.17 2.145±1.03 0.098±0.03 0.307±0.08
ENSMUSG00000039057 ENSMUST00000042103 0.013±0.01 0.009±0.00 N/A 3.683±1.84 0.130±0.03 0.112±0.03 0.004±0.00 0.024±0.01 0.011±0.00 0.109±0.03 0.013±0.01 0.090±0.02 0.052±0.06 0.109±0.08

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