C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042352 Zmat4-001 ENSMUSG00000037492 10090 + 8:23669658-24063105 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042352
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042352 0.065±0.06 0.071±0.01 0.060±0.00 4.316±2.12 0.117±0.04 0.100±0.05 0.056±0.02 0.074±0.04 0.009±0.01 0.544±0.10 0.077±0.04 0.134±0.07 0.487±0.40 0.036±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AU CIL_0003AU_0002 CGP 8:23411502-24156585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297737 ZMAT4-002 protein_coding Homo_sapiens 0 1027
ENST00000315769 ZMAT4-001 protein_coding Homo_sapiens 0 560
ENST00000518242 ZMAT4-008 retained_intron Homo_sapiens 0 318
ENST00000519406 ZMAT4-003 protein_coding Homo_sapiens 0 723
ENST00000519806 ZMAT4-009 retained_intron Homo_sapiens 0 320
ENST00000522623 ZMAT4-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000523188 ZMAT4-007 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000523542 ZMAT4-005 nonsense_mediated_decay Homo_sapiens 0 296

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