C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003AU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035521-ENSDARG00000092987 CGP 7955 5:29133524-29363862
GeneTranscriptPositionBiotype
ENSDARG00000035521 (sfrp1a)
secreted frizzled-related protein 1a
ENSDART00000051491 (sfrp1a-001) 29170026-29183294 protein_coding
ENSDART00000123635 (sfrp1a-002) 29133524-29182724 protein_coding
ENSDARG00000092987 (zmat4a)
zinc finger, matrin type 4a
ENSDART00000136488 (zmat4a-001) 29227994-29363862 protein_coding
CIL_0003AU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031548-ENSMUSG00000037492 CGP 10090 8:23411502-24156585
GeneTranscriptPositionBiotype
ENSMUSG00000031548 (Sfrp1)
secreted frizzled-related protein 1
ENSMUST00000033952 (Sfrp1-001) 23411502-23449632 protein_coding
ENSMUSG00000037492 (Zmat4)
zinc finger, matrin type 4
ENSMUST00000042352 (Zmat4-001) 23669658-24063105 protein_coding
ENSMUST00000123412 (Zmat4-002) 23669658-24156585 nonsense_mediated_decay
ENSMUST00000131410 (Zmat4-003) 23636019-23902111 protein_coding
ENSMUST00000135747 (Zmat4-004) 23700821-23797401 protein_coding
ENSMUST00000146774 (Zmat4-005) 23929053-24015192 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AU_0001ENSDARG00000035521ENSDART00000051491ENSDART00000123635ENSDARG00000092987ENSDART00000136488CIL_0003AU_0002ENSMUSG00000031548ENSMUST00000033952ENSMUSG00000037492ENSMUST00000042352ENSMUST00000123412ENSMUST00000131410ENSMUST00000135747ENSMUST00000146774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AU_0001ENSDARG00000035521ENSDART00000051491ENSDARG00000092987ENSDART00000136488CIL_0003AU_0002ENSMUSG00000031548ENSMUST00000033952ENSMUSG00000037492ENSMUST00000042352ENSMUST00000123412ENSMUST00000131410ENSMUST00000135747ENSMUST00000146774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035521 ENSDART00000051491 N/A N/A N/A 3.246±0.00 N/A N/A 8.880±0.00 N/A 0.792±0.00 N/A 2.212±0.00 N/A N/A N/A
ENSDART00000123635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092987 ENSDART00000136488 N/A N/A N/A 7.196±5.01 N/A N/A 0.053±0.00 0.199±0.00 N/A N/A 0.531±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031548 ENSMUST00000033952 3.671±1.52 11.334±0.86 8.893±1.14 8.937±5.03 4.780±1.26 13.974±3.19 3.165±0.19 34.138±2.33 1.893±1.92 5.572±0.92 0.394±0.10 18.957±6.37 4.702±4.06 0.603±0.25
ENSMUSG00000037492 ENSMUST00000042352 0.065±0.06 0.071±0.01 0.060±0.00 4.316±2.12 0.117±0.04 0.100±0.05 0.056±0.02 0.074±0.04 0.009±0.01 0.544±0.10 0.077±0.04 0.134±0.07 0.487±0.40 0.036±0.02
ENSMUST00000123412 N/A 0.187±0.08 N/A N/A 0.249±0.10 0.091±0.02 N/A 0.242±0.00 N/A N/A N/A 0.118±0.06 N/A N/A
ENSMUST00000131410 N/A N/A N/A N/A N/A 0.401±0.00 N/A 0.454±0.22 N/A N/A 0.107±0.00 0.334±0.10 N/A N/A
ENSMUST00000135747 0.453±0.00 N/A N/A N/A 0.711±0.12 N/A 0.113±0.00 N/A N/A N/A N/A 0.666±0.00 N/A 0.721±0.00
ENSMUST00000146774 0.420±0.00 N/A N/A N/A N/A N/A N/A 0.201±0.08 N/A N/A N/A 0.396±0.00 0.974±0.00 N/A

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