C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillarin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042405 Fbl-201 ENSMUSG00000046865 10090 + 7:28169748-28179269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042405 25.889±19.29 34.090±9.09 42.850±5.43 52.115±23.58 26.308±5.69 23.249±1.56 13.507±2.26 24.633±3.29 86.452±75.11 21.935±1.46 10.102±1.05 50.140±7.17 77.657±40.99 22.852±4.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0001652 IDA granular component
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0006364 TAS rRNA processing
GO:0008033 IEA tRNA processing
GO:0015030 IDA Cajal body
GO:0016020 IEA membrane
GO:0016074 IMP snoRNA metabolic process
GO:0030515 TAS snoRNA binding
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:1990258 ISS histone glutamine methylation
GO:1990259 ISS histone-glutamine methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221801 FBL-001 protein_coding Homo_sapiens 0 1112
ENST00000338333 FBLL1-001 protein_coding Homo_sapiens 0 501
ENST00000593503 FBL-007 processed_transcript Homo_sapiens 0 638
ENST00000594309 FBL-012 protein_coding Homo_sapiens 0 473
ENST00000594443 FBL-003 nonsense_mediated_decay Homo_sapiens 0 811
ENST00000595545 FBL-009 protein_coding Homo_sapiens 0 881
ENST00000597224 FBL-006 protein_coding Homo_sapiens 0 896
ENST00000597634 FBL-005 protein_coding Homo_sapiens 0 785
ENST00000598417 FBL-011 protein_coding Homo_sapiens 0 449
ENST00000599134 FBL-010 protein_coding Homo_sapiens 0 390
ENST00000599159 FBL-002 retained_intron Homo_sapiens 0 479
ENST00000601274 FBL-004 protein_coding Homo_sapiens 0 917

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