C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DIS3 mitotic control homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042471 Dis3-201 ENSMUSG00000033166 10090 - 14:99076634-99099770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042471 3.664±0.00 2.083±0.64 5.666±1.96 6.458±1.65 1.858±0.39 1.130±0.37 0.673±0.05 1.529±0.41 4.660±4.87 1.138±0.43 1.621±0.57 3.814±2.19 10.339±5.03 7.444±6.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095B CIL_00095B_0002 VISTA 14:98519484-99120234
CIL_000955 CIL_000955_0002 VISTA 14:98530064-99131289
CIL_0009CH CIL_0009CH_0002 VISTA 14:98532300-99134612
CIL_0009CG CIL_0009CG_0002 VISTA 14:98538461-99140576
CIL_000956 CIL_000956_0002 VISTA 14:98594511-99195418
CIL_0009CJ CIL_0009CJ_0002 VISTA 14:98658352-99259867
CIL_0005KC CIL_0005KC_0003 CGP 14:99046427-99099770
CIL_0002NH CIL_0002NH_0002 CGP 14:99076634-99254493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000175 ISS 3'-5'-exoribonuclease activity
GO:0000176 ISS nuclear exosome (RNase complex)
GO:0003723 IEA RNA binding
GO:0004519 ISS endonuclease activity
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing
GO:0016020 IEA membrane
GO:0016075 IEA rRNA catabolic process
GO:0043547 IEA positive regulation of GTPase activity
GO:0071034 IEA CUT catabolic process
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377767 DIS3-001 protein_coding Homo_sapiens 0 3267
ENST00000377780 DIS3-002 protein_coding Homo_sapiens 0 2850
ENST00000475871 DIS3-004 processed_transcript Homo_sapiens 0 272
ENST00000490646 DIS3-003 nonsense_mediated_decay Homo_sapiens 0 1877
ENST00000545453 DIS3-201 protein_coding Homo_sapiens 0 2979

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