C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042601 Dhx38-201 ENSMUSG00000037993 10090 - 8:109548017-109565601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042601 6.583±2.43 6.430±2.76 5.419±0.65 13.993±8.97 4.347±2.56 5.829±3.44 2.291±0.79 4.360±2.09 4.815±2.47 7.233±2.94 3.060±0.49 9.924±9.88 18.538±11.12 14.563±12.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FG CIL_0008FG_0002 VISTA 8:109010589-109613918
CIL_00098B CIL_00098B_0002 VISTA 8:109116597-109718209
CIL_00098E CIL_00098E_0002 VISTA 8:109136455-109737561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000128289 dhx38-201 protein_coding Danio_rerio 0 1834
ENSDART00000076056 dhx38-001 protein_coding Danio_rerio 0 1834
ENST00000268482 DHX38-001 protein_coding Homo_sapiens 0 4905
ENST00000562774 DHX38-017 protein_coding Homo_sapiens 0 414
ENST00000563819 DHX38-015 protein_coding Homo_sapiens 0 571
ENST00000564622 DHX38-014 retained_intron Homo_sapiens 0 283
ENST00000566329 DHX38-018 retained_intron Homo_sapiens 0 750
ENST00000567142 DHX38-016 protein_coding Homo_sapiens 0 789
ENST00000567552 DHX38-011 retained_intron Homo_sapiens 0 595
ENST00000569935 DHX38-012 retained_intron Homo_sapiens 0 699
ENST00000569952 DHX38-013 retained_intron Homo_sapiens 0 278
ENST00000579387 DHX38-002 nonsense_mediated_decay Homo_sapiens 0 1786

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