C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT and NTRK-like family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042767 Slitrk5-201 ENSMUSG00000033214 10090 + 14:111675115-111683134 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042767 0.021±0.02 0.103±0.04 0.192±0.15 8.332±2.01 0.018±0.00 0.217±0.05 0.044±0.01 0.014±0.01 0.014±0.01 0.018±0.00 0.024±0.01 0.062±0.04 0.028±0.02 0.046±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EA CIL_0000EA_0002 CGP 14:110748578-111683134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007268 IMP synaptic transmission
GO:0007409 IDA axonogenesis
GO:0007625 IMP grooming behavior
GO:0009410 IMP response to xenobiotic stimulus
GO:0016021 ISS integral component of membrane
GO:0021756 IMP striatum development
GO:0030534 IMP adult behavior
GO:0043235 ISO receptor complex
GO:0043588 IMP skin development
GO:0048813 IMP dendrite morphogenesis
GO:0072358 IMP cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325089 SLITRK5-001 protein_coding Homo_sapiens 0 4060

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