C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT and NTRK-like family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000325089 SLITRK5-001 ENSG00000165300 9606 + 13:87672615-87696272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325089 0.023±0.00 0.020±0.00 0.009±0.00 0.846±0.00 0.043±0.02 0.055±0.00 0.013±0.00 0.032±0.01 0.031±0.03 0.083±0.04 0.008±0.00 0.027±0.03 0.002±0.00 0.148±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EA CIL_0000EA_0001 CGP 13:85792790-87696272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007268 IEA synaptic transmission
GO:0007409 IEA axonogenesis
GO:0007625 IEA grooming behavior
GO:0009410 IEA response to xenobiotic stimulus
GO:0016021 IEA integral component of membrane
GO:0021756 IEA striatum development
GO:0030534 IEA adult behavior
GO:0043235 IDA receptor complex
GO:0043588 IEA skin development
GO:0048813 IEA dendrite morphogenesis
GO:0072358 IEA cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042767 Slitrk5-201 protein_coding Mus_musculus 0 4060

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