C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000EA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184564-ENSG00000165300 CGP 9606 13:85792790-87696272
GeneTranscriptPositionBiotype
ENSG00000165300 (SLITRK5)
SLIT and NTRK-like family, member 5 		ENST00000325089 (SLITRK5-001) 87672615-87696272 protein_coding
ENSG00000184564 (SLITRK6)
SLIT and NTRK-like family, member 6 		ENST00000400286 (SLITRK6-001) 85792790-85799488 protein_coding
ENSG00000228074 (UBBP5)
ubiquitin B pseudogene 5 		ENST00000446970 (UBBP5-001) 87219004-87219269 processed_pseudogene
ENSG00000228824 (MIR4500HG)
MIR4500 host gene (non-protein coding) 		ENST00000436290 (MIR4500HG-001) 87443987-87670963 lincRNA
ENST00000441617 (MIR4500HG-002) 87584858-87671259 lincRNA
ENST00000450888 (MIR4500HG-005) 87427214-87460969 lincRNA
ENST00000453832 (MIR4500HG-003) 87612273-87671106 lincRNA
ENST00000606590 (MIR4500HG-004) 87615592-87671119 lincRNA
ENSG00000233528 (LINC00430)
long intergenic non-protein coding RNA 430 		ENST00000457672 (LINC00430-001) 86911918-86937016 lincRNA
ENST00000609962 (LINC00430-002) 86935661-86936612 lincRNA
ENSG00000272515 (RP11-29P20.1)
 ENST00000607405 (RP11-29P20.1-001) 87607907-87609234 lincRNA
ENSG00000277914 (DDX6P2)
DEAD (Asp-Glu-Ala-Asp) box helicase 6 pseudogene 2 		ENST00000619520 (DDX6P2-001) 86275493-86277262 processed_pseudogene
CIL_0000EA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045871-ENSMUSG00000033214 CGP 10090 14:110748578-111683134
GeneTranscriptPositionBiotype
ENSMUSG00000033214 (Slitrk5)
SLIT and NTRK-like family, member 5 		ENSMUST00000042767 (Slitrk5-201) 111675115-111683134 protein_coding
ENSMUSG00000045871 (Slitrk6)
SLIT and NTRK-like family, member 6 		ENSMUST00000078386 (Slitrk6-201) 110748578-110755149 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EA_0001ENSG00000165300ENST00000325089ENSG00000184564ENST00000400286ENSG00000228074ENST00000446970ENSG00000228824ENST00000436290ENST00000441617ENST00000450888ENST00000453832ENST00000606590ENSG00000233528ENST00000457672ENST00000609962ENSG00000272515ENST00000607405ENSG00000277914ENST00000619520CIL_0000EA_0002ENSMUSG00000033214ENSMUST00000042767ENSMUSG00000045871ENSMUST00000078386
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EA_0001ENSG00000165300ENST00000325089ENSG00000184564ENST00000400286ENSG00000228074ENST00000446970ENSG00000228824ENST00000436290ENST00000441617ENST00000450888ENST00000453832ENST00000606590ENSG00000233528ENST00000457672ENSG00000272515ENST00000607405ENSG00000277914ENST00000619520CIL_0000EA_0002ENSMUSG00000033214ENSMUST00000042767ENSMUSG00000045871ENSMUST00000078386
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165300 ENST00000325089 0.023±0.00 0.020±0.00 0.009±0.00 0.846±0.00 0.043±0.02 0.055±0.00 0.013±0.00 0.032±0.01 0.031±0.03 0.083±0.04 0.008±0.00 0.027±0.03 0.002±0.00 0.148±0.01
ENSG00000184564 ENST00000400286 0.014±0.00 0.022±0.00 0.011±0.00 0.051±0.04 0.609±0.45 1.954±0.57 0.136±0.11 0.582±0.48 3.242±3.20 1.502±0.20 N/A 0.083±0.03 0.230±0.16 0.285±0.16
ENSG00000228074 ENST00000446970 N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000228824 ENST00000436290 N/A N/A 0.204±0.00 0.602±0.00 N/A N/A N/A 0.080±0.00 0.184±0.00 N/A N/A 0.010±0.00 N/A 0.070±0.00
ENST00000441617 N/A N/A N/A N/A 0.283±0.00 N/A 0.027±0.00 N/A N/A N/A N/A 0.073±0.00 N/A 0.030±0.00
ENST00000450888 N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A
ENST00000453832 N/A 0.078±0.00 N/A N/A 0.136±0.00 N/A N/A 0.038±0.00 N/A N/A N/A 0.022±0.00 N/A 0.144±0.08
ENST00000606590 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A
ENSG00000233528 ENST00000457672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENST00000609962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272515 ENST00000607405 N/A N/A N/A 0.714±0.43 N/A 0.056±0.00 N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.123±0.12
ENSG00000277914 ENST00000619520 N/A 0.008±0.00 N/A 0.017±0.00 N/A 0.008±0.00 0.015±0.00 N/A N/A N/A 0.007±0.00 N/A N/A 0.030±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033214 ENSMUST00000042767 0.021±0.02 0.103±0.04 0.192±0.15 8.332±2.01 0.018±0.00 0.217±0.05 0.044±0.01 0.014±0.01 0.014±0.01 0.018±0.00 0.024±0.01 0.062±0.04 0.028±0.02 0.046±0.02
ENSMUSG00000045871 ENSMUST00000078386 0.105±0.07 0.056±0.02 3.553±0.63 0.874±0.25 0.352±0.07 0.709±0.13 0.351±0.01 0.449±0.12 0.087±0.05 0.641±0.22 0.017±0.01 0.154±0.05 0.076±0.09 0.032±0.02

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