C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 210, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042852 Fam210a-001 ENSMUSG00000038121 10090 - 18:68260187-68300333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042852 3.460±0.09 9.616±1.37 1.713±0.00 2.644±0.56 2.971±1.01 2.896±0.11 7.591±0.46 6.241±2.32 6.092±2.73 3.118±0.43 10.080±1.70 5.465±1.32 2.355±0.83 1.088±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z8 CIL_0007Z8_0002 VISTA 18:67758776-68359713
CIL_0005Q2 CIL_0005Q2_0003 CGP 18:67933257-68300333
CIL_0002FK CIL_0002FK_0003 CGP 18:68260187-68324852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322247 FAM210A-001 protein_coding Homo_sapiens 0 682
ENST00000359446 LDLRAD4-002 protein_coding Homo_sapiens 0 254
ENST00000361303 LDLRAD4-006 retained_intron Homo_sapiens 0 254
ENST00000399848 LDLRAD4-001 protein_coding Homo_sapiens 0 254
ENST00000402563 FAM210A-201 protein_coding Homo_sapiens 0 680
ENST00000435606 LDLRAD4-007 retained_intron Homo_sapiens 0 254
ENST00000585785 FAM210A-002 processed_transcript Homo_sapiens 0.000000002 71
ENST00000588475 FAM210A-003 processed_transcript Homo_sapiens 0 302
ENST00000591269 FAM210A-004 protein_coding Homo_sapiens 0 350
ENST00000592976 FAM210A-005 protein_coding Homo_sapiens 0 630

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