C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Q2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070555-ENSDARG00000035985 CGP 7955 19:13067069-13270534
GeneTranscriptPositionBiotype
ENSDARG00000035985 (FAM210A (1 of 2))
family with sequence similarity 210, member A 		ENSDART00000103692 (FAM210A (1 of 2)-001) 13252540-13270534 protein_coding
ENSDART00000122263 (FAM210A (1 of 2)-201) 13254275-13267956 protein_coding
ENSDART00000151184 (FAM210A (1 of 2)-002) 13254263-13270248 protein_coding
ENSDARG00000070555 (LDLRAD4 (2 of 2))
low density lipoprotein receptor class A domain containing 4 		ENSDART00000103683 (LDLRAD4 (2 of 2)-201) 13136123-13246405 protein_coding
ENSDART00000135706 (LDLRAD4 (2 of 2)-001) 13067069-13244981 protein_coding
ENSDART00000151508 (LDLRAD4 (2 of 2)-002) 13205703-13237362 protein_coding
ENSDARG00000084742 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120142 (5S_rRNA.808-201) 13255275-13255389 rRNA
CIL_0005Q2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168675-ENSG00000177150 CGP 9606 18:13217498-13726663
GeneTranscriptPositionBiotype
ENSG00000101654 (RNMT)
RNA (guanine-7-) methyltransferase 		ENST00000262173 (RNMT-201) 13731474-13764555 protein_coding
ENST00000383314 (RNMT-001) 13726661-13764558 protein_coding
ENST00000543302 (RNMT-003) 13726660-13760285 protein_coding
ENST00000588417 (RNMT-008) 13741620-13743074 retained_intron
ENST00000588457 (RNMT-004) 13726667-13762344 nonsense_mediated_decay
ENST00000589866 (RNMT-007) 13730438-13760067 protein_coding
ENST00000591746 (RNMT-006) 13726769-13731821 protein_coding
ENST00000591922 (RNMT-010) 13762301-13764555 processed_transcript
ENST00000592764 (RNMT-005) 13726704-13764556 protein_coding
ENST00000593007 (RNMT-009) 13746273-13762627 protein_coding
ENSG00000168675 (LDLRAD4)
low density lipoprotein receptor class A domain containing 4 		ENST00000359446 (LDLRAD4-002) 13278103-13652754 protein_coding
ENST00000361303 (LDLRAD4-006) 13620868-13652754 retained_intron
ENST00000399848 (LDLRAD4-001) 13218787-13652755 protein_coding
ENST00000435606 (LDLRAD4-007) 13620868-13652754 retained_intron
ENST00000585931 (LDLRAD4-004) 13611764-13646734 protein_coding
ENST00000586207 (LDLRAD4-015) 13542292-13645205 processed_transcript
ENST00000586222 (LDLRAD4-012) 13382554-13438332 protein_coding
ENST00000586765 (LDLRAD4-018) 13612619-13645659 protein_coding
ENST00000587440 (LDLRAD4-016) 13542407-13543214 processed_transcript
ENST00000587600 (LDLRAD4-014) 13465025-13491588 processed_transcript
ENST00000587757 (LDLRAD4-003) 13611464-13645777 protein_coding
ENST00000587905 (LDLRAD4-010) 13218026-13621143 protein_coding
ENST00000590115 (LDLRAD4-011) 13218760-13278376 retained_intron
ENST00000590308 (LDLRAD4-005) 13612029-13615748 processed_transcript
ENST00000590371 (LDLRAD4-009) 13217498-13387577 processed_transcript
ENST00000592657 (LDLRAD4-017) 13542916-13543623 processed_transcript
ENST00000592812 (LDLRAD4-019) 13612625-13616159 processed_transcript
ENST00000592991 (LDLRAD4-008) 13641758-13645712 protein_coding
ENST00000593236 (LDLRAD4-013) 13465015-13621270 protein_coding
ENSG00000177150 (FAM210A)
family with sequence similarity 210, member A 		ENST00000322247 (FAM210A-001) 13663347-13726560 protein_coding
ENST00000402563 (FAM210A-201) 13663351-13726592 protein_coding
ENST00000585785 (FAM210A-002) 13665883-13726592 processed_transcript
ENST00000588475 (FAM210A-003) 13666003-13726505 processed_transcript
ENST00000589346 (FAM210A-006) 13666231-13671939 protein_coding
ENST00000591269 (FAM210A-004) 13671912-13726663 protein_coding
ENST00000592976 (FAM210A-005) 13666494-13726586 protein_coding
ENSG00000242707 (RN7SL362P)
RNA, 7SL, cytoplasmic 362, pseudogene 		ENST00000494228 (RN7SL362P-201) 13715102-13715368 misc_RNA
ENSG00000263527 (MIR4526)
microRNA 4526 		ENST00000583168 (MIR4526-201) 13611114-13611200 miRNA
ENSG00000266146 (MIR5190)
microRNA 5190 		ENST00000581537 (MIR5190-201) 13459947-13460026 miRNA
ENSG00000267136 (RP11-53B2.3)
 ENST00000585366 (RP11-53B2.3-001) 13514520-13522888 antisense
ENSG00000267177 (RP11-756J15.3)
 ENST00000592655 (RP11-756J15.3-001) 13234945-13236470 antisense
ENSG00000267366 (RP11-53B2.5)
 ENST00000589045 (RP11-53B2.5-001) 13500641-13501289 antisense
ENSG00000267393 (RP11-691H4.3)
 ENST00000588204 (RP11-691H4.3-001) 13362203-13366243 antisense
ENSG00000267503 (RP11-53B2.4)
 ENST00000590042 (RP11-53B2.4-001) 13561399-13565035 antisense
ENSG00000267529 (RP11-53B2.1)
 ENST00000590468 (RP11-53B2.1-001) 13471850-13472670 antisense
ENST00000624889 (RP11-53B2.1-002) 13471012-13472709 TEC
ENSG00000267690 (LDLRAD4-AS1)
LDLRAD4 antisense RNA 1 		ENST00000588672 (LDLRAD4-AS1-001) 13419421-13427480 antisense
ENSG00000267694 (RP11-691H4.4)
 ENST00000585817 (RP11-691H4.4-001) 13461020-13470823 antisense
ENSG00000267702 (RP11-53B2.2)
 ENST00000587344 (RP11-53B2.2-001) 13486462-13490676 sense_intronic
ENSG00000272746 (RP11-53B2.6)
 ENST00000610087 (RP11-53B2.6-001) 13526078-13526688 sense_intronic
ENSG00000279020 (C18orf15)
chromosome 18 open reading frame 15 		ENST00000623680 (C18orf15-001) 13239543-13242076 TEC
ENSG00000279275 (RP11-756J15.2)
 ENST00000623585 (RP11-756J15.2-001) 13279415-13280110 TEC
ENSG00000279962 (RP11-720L3.1)
 ENST00000624611 (RP11-720L3.1-001) 13710249-13710484 TEC
CIL_0005Q2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024544-ENSMUSG00000038121 CGP 10090 18:67933257-68300333
GeneTranscriptPositionBiotype
ENSMUSG00000024544 (Ldlrad4)
low density lipoprotein receptor class A domain containing 4 		ENSMUST00000063775 (Ldlrad4-201) 67933257-68255549 protein_coding
ENSMUSG00000038121 (Fam210a)
family with sequence similarity 210, member A 		ENSMUST00000042852 (Fam210a-001) 68260187-68300333 protein_coding
ENSMUST00000152193 (Fam210a-002) 68275917-68300202 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Q2_0001ENSDARG00000035985ENSDART00000103692ENSDART00000122263ENSDART00000151184ENSDARG00000070555ENSDART00000103683ENSDART00000135706ENSDART00000151508ENSDARG00000084742ENSDART00000120142CIL_0005Q2_0002ENSG00000101654ENST00000262173ENST00000383314ENST00000543302ENST00000588417ENST00000588457ENST00000589866ENST00000591746ENST00000591922ENST00000592764ENST00000593007ENSG00000168675ENST00000359446ENST00000361303ENST00000399848ENST00000435606ENST00000585931ENST00000586207ENST00000586222ENST00000586765ENST00000587440ENST00000587600ENST00000587757ENST00000587905ENST00000590115ENST00000590308ENST00000590371ENST00000592657ENST00000592812ENST00000592991ENST00000593236ENSG00000177150ENST00000322247ENST00000402563ENST00000585785ENST00000588475ENST00000589346ENST00000591269ENST00000592976ENSG00000242707ENST00000494228ENSG00000263527ENST00000583168ENSG00000266146ENST00000581537ENSG00000267136ENST00000585366ENSG00000267177ENST00000592655ENSG00000267366ENST00000589045ENSG00000267393ENST00000588204ENSG00000267503ENST00000590042ENSG00000267529ENST00000590468ENST00000624889ENSG00000267690ENST00000588672ENSG00000267694ENST00000585817ENSG00000267702ENST00000587344ENSG00000272746ENST00000610087ENSG00000279020ENST00000623680ENSG00000279275ENST00000623585ENSG00000279962ENST00000624611CIL_0005Q2_0003ENSMUSG00000024544ENSMUST00000063775ENSMUSG00000038121ENSMUST00000042852ENSMUST00000152193
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Q2_0001ENSDARG00000035985ENSDART00000103692ENSDART00000122263ENSDARG00000070555ENSDART00000103683ENSDART00000135706ENSDARG00000084742ENSDART00000120142CIL_0005Q2_0002ENSG00000101654ENST00000262173ENST00000383314ENST00000543302ENST00000589866ENST00000592764ENSG00000168675ENST00000359446ENST00000361303ENST00000399848ENST00000585931ENST00000586222ENST00000590308ENSG00000177150ENST00000322247ENST00000402563ENST00000592976ENSG00000242707ENST00000494228ENSG00000263527ENST00000583168ENSG00000266146ENST00000581537ENSG00000267136ENST00000585366ENSG00000267177ENST00000592655ENSG00000267366ENST00000589045ENSG00000267393ENST00000588204ENSG00000267503ENST00000590042ENSG00000267529ENST00000590468ENST00000624889ENSG00000267690ENST00000588672ENSG00000267694ENST00000585817ENSG00000267702ENST00000587344ENSG00000272746ENST00000610087ENSG00000279020ENST00000623680ENSG00000279275ENST00000623585ENSG00000279962ENST00000624611CIL_0005Q2_0003ENSMUSG00000024544ENSMUST00000063775ENSMUSG00000038121ENSMUST00000042852ENSMUST00000152193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035985 ENSDART00000103692 N/A N/A N/A 12.634±1.92 N/A N/A 10.412±3.94 11.453±5.65 1.454±0.00 N/A 10.214±0.00 N/A N/A N/A
ENSDART00000122263 N/A N/A N/A N/A N/A N/A N/A N/A 1.239±0.00 N/A N/A N/A N/A N/A
ENSDART00000151184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070555 ENSDART00000103683 N/A N/A N/A 6.432±1.89 N/A N/A 5.680±1.71 1.779±0.02 0.087±0.00 N/A 1.320±0.00 N/A N/A N/A
ENSDART00000135706 N/A N/A N/A 9.586±1.85 N/A N/A N/A N/A N/A N/A 0.985±0.00 N/A N/A N/A
ENSDART00000151508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000084742 ENSDART00000120142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.167±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101654 ENST00000262173 N/A 2.714±0.00 N/A N/A 1.400±0.00 0.922±0.33 2.993±2.47 1.790±0.83 1.056±0.12 0.924±0.00 N/A 3.932±1.09 2.581±0.76 4.298±1.07
ENST00000383314 N/A N/A N/A 4.481±2.99 2.632±0.00 1.072±0.00 N/A N/A 2.348±0.00 N/A 0.747±0.00 4.534±0.00 N/A N/A
ENST00000543302 N/A N/A N/A N/A N/A N/A N/A N/A 2.994±0.00 4.788±0.00 N/A 2.931±0.00 N/A N/A
ENST00000588417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589866 N/A N/A N/A N/A 4.319±0.00 1.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592764 2.069±0.00 N/A N/A N/A 1.520±0.00 1.565±0.00 N/A 1.712±0.00 1.563±0.00 2.152±0.00 N/A 3.154±1.04 2.081±1.14 4.216±0.68
ENST00000593007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168675 ENST00000359446 0.917±0.00 1.282±0.00 0.878±0.00 3.524±0.00 2.006±0.43 0.913±0.00 2.243±0.00 0.687±0.00 0.783±0.00 N/A 0.955±0.63 0.979±0.00 0.904±0.37 2.753±0.00
ENST00000361303 N/A N/A N/A N/A 0.858±0.00 0.852±0.00 N/A N/A N/A N/A N/A N/A 0.413±0.00 N/A
ENST00000399848 0.610±0.00 N/A N/A N/A 0.700±0.00 0.308±0.00 0.922±0.53 0.450±0.00 N/A 0.728±0.00 N/A N/A 0.471±0.00 0.578±0.00
ENST00000435606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585931 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.718±0.00 N/A N/A 2.037±0.00 N/A
ENST00000586207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586222 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.393±0.00 N/A 3.139±0.00 N/A N/A
ENST00000586765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590308 N/A N/A N/A 5.858±3.12 N/A N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A 0.767±0.00
ENST00000590371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177150 ENST00000322247 N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A N/A 0.813±0.00 N/A N/A N/A 1.773±0.00
ENST00000402563 1.364±0.00 2.431±0.00 N/A 1.960±0.00 0.962±0.00 1.292±0.52 4.241±2.91 2.099±0.95 1.611±0.17 N/A 2.057±0.51 2.114±0.29 1.711±0.12 1.856±0.00
ENST00000585785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592976 N/A N/A 1.732±0.00 N/A N/A 4.329±0.00 3.528±0.00 N/A N/A N/A 3.116±0.00 N/A N/A N/A
ENSG00000242707 ENST00000494228 N/A N/A 1.100±0.00 N/A N/A 1.059±0.00 0.436±0.00 N/A N/A 0.181±0.00 N/A N/A N/A N/A
ENSG00000263527 ENST00000583168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.223±0.00
ENSG00000266146 ENST00000581537 N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000267136 ENST00000585366 0.010±0.00 0.203±0.00 0.401±0.00 0.122±0.07 0.137±0.06 0.037±0.00 0.213±0.10 0.226±0.20 0.199±0.17 0.558±0.53 0.562±0.00 0.217±0.20 0.007±0.00 0.054±0.00
ENSG00000267177 ENST00000592655 3.813±0.00 4.815±0.00 N/A 2.778±0.00 3.130±0.00 0.405±0.00 0.641±0.00 3.579±0.00 1.405±0.00 1.766±0.00 0.751±0.00 12.844±11.63 N/A 2.230±0.20
ENSG00000267366 ENST00000589045 N/A N/A N/A 0.438±0.00 1.252±0.00 0.469±0.45 0.065±0.04 0.093±0.00 0.480±0.00 0.460±0.23 N/A 0.175±0.10 0.089±0.00 0.067±0.02
ENSG00000267393 ENST00000588204 N/A N/A 0.752±0.00 N/A 0.069±0.00 0.135±0.00 0.745±0.00 0.103±0.07 1.091±0.00 N/A 3.008±0.00 0.083±0.00 N/A N/A
ENSG00000267503 ENST00000590042 N/A 0.054±0.00 N/A 0.019±0.00 N/A 0.806±0.00 0.083±0.00 0.710±0.00 N/A 0.282±0.00 N/A 0.120±0.03 0.078±0.00 0.238±0.00
ENSG00000267529 ENST00000590468 N/A 0.049±0.00 N/A 0.271±0.00 N/A 1.091±0.00 N/A N/A N/A N/A N/A 0.364±0.24 0.042±0.00 N/A
ENST00000624889 0.010±0.00 0.014±0.00 0.164±0.00 0.040±0.02 0.332±0.24 1.326±0.00 0.325±0.27 0.110±0.00 0.504±0.00 N/A N/A 0.152±0.12 0.034±0.00 0.076±0.00
ENSG00000267690 ENST00000588672 N/A 0.108±0.00 0.120±0.00 0.089±0.00 0.013±0.00 0.290±0.28 0.114±0.10 0.324±0.00 0.139±0.04 0.150±0.12 0.317±0.26 0.046±0.00 0.074±0.05 0.057±0.01
ENSG00000267694 ENST00000585817 N/A 0.044±0.00 N/A N/A N/A 0.881±0.00 0.163±0.00 N/A N/A N/A N/A N/A 0.420±0.00 0.304±0.00
ENSG00000267702 ENST00000587344 0.019±0.00 0.269±0.00 0.604±0.00 0.152±0.10 0.808±0.69 0.623±0.56 0.247±0.10 0.622±0.50 0.537±0.47 0.853±0.82 0.208±0.16 0.076±0.05 0.025±0.00 0.218±0.09
ENSG00000272746 ENST00000610087 0.055±0.00 0.376±0.00 N/A 0.046±0.01 0.375±0.19 0.733±0.00 0.569±0.25 0.536±0.48 0.255±0.16 0.174±0.14 0.620±0.00 0.113±0.06 0.260±0.00 0.172±0.09
ENSG00000279020 ENST00000623680 0.207±0.00 0.484±0.00 0.097±0.00 0.210±0.06 0.242±0.08 0.165±0.04 0.117±0.03 0.167±0.04 0.123±0.02 0.192±0.00 0.158±0.07 N/A 0.027±0.00 0.152±0.00
ENSG00000279275 ENST00000623585 N/A 0.050±0.00 N/A 0.077±0.01 0.183±0.14 0.483±0.36 0.109±0.00 1.983±0.00 1.067±0.00 1.197±0.00 N/A 0.233±0.00 N/A 0.046±0.00
ENSG00000279962 ENST00000624611 0.237±0.00 1.762±0.00 N/A 0.743±0.00 0.613±0.00 0.245±0.00 0.392±0.00 1.569±0.00 0.073±0.00 0.556±0.00 0.365±0.00 4.138±3.56 N/A 0.423±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024544 ENSMUST00000063775 10.356±4.61 7.170±1.02 8.258±0.00 2.960±0.07 6.646±1.15 5.852±2.83 7.042±0.50 9.999±2.69 3.299±1.24 10.390±1.67 1.724±0.68 12.207±2.99 0.504±0.47 1.116±0.13
ENSMUSG00000038121 ENSMUST00000042852 3.460±0.09 9.616±1.37 1.713±0.00 2.644±0.56 2.971±1.01 2.896±0.11 7.591±0.46 6.241±2.32 6.092±2.73 3.118±0.43 10.080±1.70 5.465±1.32 2.355±0.83 1.088±0.57
ENSMUST00000152193 N/A 22.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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