C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000486_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128340-ENSG00000100055 CGP 9606 22:37225261-37315345
GeneTranscriptPositionBiotype
ENSG00000100055 (CYTH4)
cytohesin 4 		ENST00000248901 (CYTH4-001) 37282383-37315345 protein_coding
ENST00000402997 (CYTH4-008) 37282475-37300173 protein_coding
ENST00000405206 (CYTH4-009) 37282487-37300271 protein_coding
ENST00000439667 (CYTH4-010) 37282531-37302019 processed_transcript
ENST00000446506 (CYTH4-013) 37309968-37313638 protein_coding
ENST00000447919 (CYTH4-011) 37300882-37303295 processed_transcript
ENST00000457992 (CYTH4-014) 37282027-37297682 protein_coding
ENST00000462927 (CYTH4-002) 37282525-37315341 retained_intron
ENST00000467664 (CYTH4-007) 37292144-37294692 retained_intron
ENST00000469886 (CYTH4-004) 37282515-37298402 retained_intron
ENST00000480510 (CYTH4-006) 37282527-37296603 retained_intron
ENSG00000128340 (RAC2)
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 		ENST00000249071 (RAC2-001) 37225261-37244270 protein_coding
ENST00000401529 (RAC2-002) 37240805-37244248 protein_coding
ENST00000405484 (RAC2-007) 37226673-37244432 protein_coding
ENST00000406508 (RAC2-004) 37225852-37244448 protein_coding
ENST00000441619 (RAC2-003) 37226753-37244441 protein_coding
ENST00000469532 (RAC2-006) 37232404-37244278 retained_intron
ENST00000481215 (RAC2-008) 37225966-37231503 retained_intron
CIL_000486_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033220-ENSMUSG00000018008 CGP 10090 15:78559169-78622019
GeneTranscriptPositionBiotype
ENSMUSG00000018008 (Cyth4)
cytohesin 4 		ENSMUST00000043069 (Cyth4-201) 78597047-78622019 protein_coding
ENSMUSG00000033220 (Rac2)
RAS-related C3 botulinum substrate 2 		ENSMUST00000043214 (Rac2-201) 78559169-78572783 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000486_0001ENSG00000100055ENST00000248901ENST00000402997ENST00000405206ENST00000439667ENST00000446506ENST00000447919ENST00000457992ENST00000462927ENST00000467664ENST00000469886ENST00000480510ENSG00000128340ENST00000249071ENST00000401529ENST00000405484ENST00000406508ENST00000441619ENST00000469532ENST00000481215CIL_000486_0002ENSMUSG00000018008ENSMUST00000043069ENSMUSG00000033220ENSMUST00000043214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000486_0001ENSG00000100055ENST00000248901ENST00000405206ENST00000439667ENST00000446506ENST00000462927ENSG00000128340ENST00000249071ENST00000401529ENST00000406508ENST00000441619ENST00000481215CIL_000486_0002ENSMUSG00000018008ENSMUST00000043069ENSMUSG00000033220ENSMUST00000043214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100055 ENST00000248901 1.136±0.00 9.587±0.00 N/A 0.911±0.39 1.995±0.73 0.296±0.10 0.379±0.00 0.611±0.24 0.535±0.00 5.832±0.00 N/A 1.644±0.72 14.096±3.12 0.635±0.00
ENST00000402997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405206 N/A N/A N/A N/A N/A N/A N/A 2.289±0.00 1.965±0.00 2.525±0.00 N/A N/A N/A N/A
ENST00000439667 N/A N/A N/A N/A 2.168±0.00 N/A N/A N/A N/A N/A 1.048±0.66 N/A N/A N/A
ENST00000446506 N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A 2.953±0.00 0.309±0.00 N/A N/A N/A
ENST00000447919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462927 0.430±0.00 N/A N/A N/A 0.682±0.00 0.253±0.00 N/A N/A N/A 3.094±0.00 N/A 0.524±0.30 N/A 0.495±0.00
ENST00000467664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128340 ENST00000249071 9.663±0.00 101.928±0.00 0.307±0.00 1.031±0.99 7.477±0.00 2.532±0.18 1.604±1.52 3.409±0.00 2.425±1.72 33.498±30.03 0.600±0.55 10.226±5.24 13.262±6.22 2.443±1.97
ENST00000401529 N/A N/A N/A N/A 1.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406508 N/A N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A 0.351±0.00 10.369±0.00 N/A N/A
ENST00000441619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.262±0.00 9.170±0.00 0.449±0.00
ENST00000469532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481215 N/A N/A N/A N/A N/A N/A N/A N/A 2.200±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018008 ENSMUST00000043069 9.349±2.68 5.194±1.28 5.381±0.83 1.338±0.41 22.772±9.44 5.216±2.02 2.334±1.06 3.526±0.74 3.182±1.95 12.985±2.15 0.802±0.69 9.311±2.80 1.344±0.65 0.351±0.26
ENSMUSG00000033220 ENSMUST00000043214 13.841±5.23 7.684±1.10 5.374±0.47 0.625±0.31 134.640±77.78 15.862±2.88 3.101±2.16 7.385±5.55 26.018±19.76 17.181±8.66 0.770±1.38 9.139±5.33 0.722±0.53 1.222±0.33

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