C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000486_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128340-ENSG00000100055 CGP 9606 22:37225261-37315345
GeneTranscriptPositionBiotype
ENSG00000100055 (CYTH4)
cytohesin 4 		ENST00000248901 (CYTH4-001) 37282383-37315345 protein_coding
ENST00000402997 (CYTH4-008) 37282475-37300173 protein_coding
ENST00000405206 (CYTH4-009) 37282487-37300271 protein_coding
ENST00000439667 (CYTH4-010) 37282531-37302019 processed_transcript
ENST00000446506 (CYTH4-013) 37309968-37313638 protein_coding
ENST00000447919 (CYTH4-011) 37300882-37303295 processed_transcript
ENST00000457992 (CYTH4-014) 37282027-37297682 protein_coding
ENST00000462927 (CYTH4-002) 37282525-37315341 retained_intron
ENST00000467664 (CYTH4-007) 37292144-37294692 retained_intron
ENST00000469886 (CYTH4-004) 37282515-37298402 retained_intron
ENST00000480510 (CYTH4-006) 37282527-37296603 retained_intron
ENSG00000128340 (RAC2)
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 		ENST00000249071 (RAC2-001) 37225261-37244270 protein_coding
ENST00000401529 (RAC2-002) 37240805-37244248 protein_coding
ENST00000405484 (RAC2-007) 37226673-37244432 protein_coding
ENST00000406508 (RAC2-004) 37225852-37244448 protein_coding
ENST00000441619 (RAC2-003) 37226753-37244441 protein_coding
ENST00000469532 (RAC2-006) 37232404-37244278 retained_intron
ENST00000481215 (RAC2-008) 37225966-37231503 retained_intron

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000486_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033220-ENSMUSG00000018008 CGP 10090 15:78559169-78622019
GeneTranscriptPositionBiotype
ENSMUSG00000018008 (Cyth4)
cytohesin 4 		ENSMUST00000043069 (Cyth4-201) 78597047-78622019 protein_coding
ENSMUSG00000033220 (Rac2)
RAS-related C3 botulinum substrate 2 		ENSMUST00000043214 (Rac2-201) 78559169-78572783 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000486_0001ENSG00000100055ENST00000248901ENST00000402997ENST00000405206ENST00000439667ENST00000446506ENST00000447919ENST00000457992ENST00000462927ENST00000467664ENST00000469886ENST00000480510ENSG00000128340ENST00000249071ENST00000401529ENST00000405484ENST00000406508ENST00000441619ENST00000469532ENST00000481215CIL_000486_0002ENSMUSG00000018008ENSMUST00000043069ENSMUSG00000033220ENSMUST00000043214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000486_0001ENSG00000100055ENST00000248901ENST00000405206ENST00000439667ENST00000446506ENST00000462927ENSG00000128340ENST00000249071ENST00000401529ENST00000406508ENST00000441619ENST00000481215CIL_000486_0002ENSMUSG00000018008ENSMUST00000043069ENSMUSG00000033220ENSMUST00000043214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100055 ENST00000248901 1.136±0.00 9.587±0.00 N/A 0.911±0.39 1.995±0.73 0.296±0.10 0.379±0.00 0.611±0.24 0.535±0.00 5.832±0.00 N/A 1.644±0.72 14.096±3.12 0.635±0.00
ENST00000402997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405206 N/A N/A N/A N/A N/A N/A N/A 2.289±0.00 1.965±0.00 2.525±0.00 N/A N/A N/A N/A
ENST00000439667 N/A N/A N/A N/A 2.168±0.00 N/A N/A N/A N/A N/A 1.048±0.66 N/A N/A N/A
ENST00000446506 N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A 2.953±0.00 0.309±0.00 N/A N/A N/A
ENST00000447919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462927 0.430±0.00 N/A N/A N/A 0.682±0.00 0.253±0.00 N/A N/A N/A 3.094±0.00 N/A 0.524±0.30 N/A 0.495±0.00
ENST00000467664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128340 ENST00000249071 9.663±0.00 101.928±0.00 0.307±0.00 1.031±0.99 7.477±0.00 2.532±0.18 1.604±1.52 3.409±0.00 2.425±1.72 33.498±30.03 0.600±0.55 10.226±5.24 13.262±6.22 2.443±1.97
ENST00000401529 N/A N/A N/A N/A 1.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406508 N/A N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A 0.351±0.00 10.369±0.00 N/A N/A
ENST00000441619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.262±0.00 9.170±0.00 0.449±0.00
ENST00000469532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481215 N/A N/A N/A N/A N/A N/A N/A N/A 2.200±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018008 ENSMUST00000043069 9.349±2.68 5.194±1.28 5.381±0.83 1.338±0.41 22.772±9.44 5.216±2.02 2.334±1.06 3.526±0.74 3.182±1.95 12.985±2.15 0.802±0.69 9.311±2.80 1.344±0.65 0.351±0.26
ENSMUSG00000033220 ENSMUST00000043214 13.841±5.23 7.684±1.10 5.374±0.47 0.625±0.31 134.640±77.78 15.862±2.88 3.101±2.16 7.385±5.55 26.018±19.76 17.181±8.66 0.770±1.38 9.139±5.33 0.722±0.53 1.222±0.33

Loading