C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043150 Acsl5-201 ENSMUSG00000024981 10090 + 19:55253369-55296627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043150 9.105±2.42 6.814±4.58 13.399±1.20 8.610±8.07 13.016±6.79 9.928±1.31 2.953±0.45 8.395±1.93 24.139±9.84 19.523±7.18 1.379±0.66 8.130±7.64 12.456±6.83 2.729±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093P CIL_00093P_0002 VISTA 19:55176600-55777537
CIL_0002FP CIL_0002FP_0002 CGP 19:55253369-55316032

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005743 IDA mitochondrial inner membrane
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:2001236 IEA regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354273 ACSL5-001 protein_coding Homo_sapiens 0 2030
ENST00000354655 ACSL5-002 protein_coding Homo_sapiens 0 1953
ENST00000356116 ACSL5-201 protein_coding Homo_sapiens 0 2030
ENST00000393081 ACSL5-202 protein_coding Homo_sapiens 0 1951
ENST00000433418 ACSL5-203 protein_coding Homo_sapiens 0 1869
ENST00000496328 ACSL5-005 processed_transcript Homo_sapiens 0 433

Loading