C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL6 corepressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378444 BCOR-003 ENSG00000183337 9606 - X:40051248-40097403 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonMuscleOvaryPlacentaTestisENST00000378444
Transcript ID Adipose Brain Breast Colon Muscle Ovary Placenta Testis
ENST00000378444 2.477±0.00 1.097±0.00 1.869±0.00 0.621±0.04 1.414±0.94 2.324±1.22 1.340±0.00 1.848±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QF CIL_0005QF_0001 CGP X:40049815-40606637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000415 IMP negative regulation of histone H3-K36 methylation
GO:0003714 IDA transcription corepressor activity
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IMP heart development
GO:0008134 IPI transcription factor binding
GO:0030502 IMP negative regulation of bone mineralization
GO:0031072 IDA heat shock protein binding
GO:0031519 IDA PcG protein complex
GO:0035518 IDA histone H2A monoubiquitination
GO:0042476 IMP odontogenesis
GO:0042826 IPI histone deacetylase binding
GO:0044212 IMP transcription regulatory region DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051572 IMP negative regulation of histone H3-K4 methylation
GO:0060021 IMP palate development
GO:0065001 IMP specification of axis polarity
GO:0070171 IMP negative regulation of tooth mineralization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115513 Bcor-001 protein_coding Mus_musculus 0 7275
ENSMUST00000065143 Bcor-003 protein_coding Mus_musculus 0 4139
ENSMUST00000115512 Bcor-002 protein_coding Mus_musculus 0 3640
ENSMUST00000124033 Bcor-004 protein_coding Mus_musculus 0 3539
ENSMUST00000043441 Bcor-005 protein_coding Mus_musculus 0 3421
ENSMUST00000145872 Bcor-006 protein_coding Mus_musculus 0 523
ENSMUST00000123004 Bcor-007 protein_coding Mus_musculus 0 396

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