C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005D6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120733-ENSG00000132563 CGP 9606 5:138352596-138446969
GeneTranscriptPositionBiotype
ENSG00000120733 (KDM3B)
lysine (K)-specific demethylase 3B 		ENST00000314358 (KDM3B-001) 138352596-138437027 protein_coding
ENST00000504095 (KDM3B-006) 138397878-138399899 retained_intron
ENST00000505756 (KDM3B-007) 138424135-138425857 retained_intron
ENST00000507996 (KDM3B-004) 138386577-138436032 nonsense_mediated_decay
ENST00000508386 (KDM3B-009) 138417808-138420785 processed_transcript
ENST00000509468 (KDM3B-008) 138426741-138428086 retained_intron
ENST00000510866 (KDM3B-002) 138372674-138437028 nonsense_mediated_decay
ENST00000512928 (KDM3B-005) 138372793-138381748 retained_intron
ENST00000542866 (KDM3B-201) 138377811-138436937 protein_coding
ENSG00000132563 (REEP2)
receptor accessory protein 2 		ENST00000254901 (REEP2-002) 138439087-138446969 protein_coding
ENST00000378339 (REEP2-001) 138439017-138446964 protein_coding
ENST00000464751 (REEP2-008) 138439110-138443858 processed_transcript
ENST00000503379 (REEP2-006) 138439111-138444705 retained_intron
ENST00000504163 (REEP2-009) 138444998-138445723 retained_intron
ENST00000506158 (REEP2-003) 138439102-138445831 protein_coding
ENST00000507511 (REEP2-005) 138439111-138445349 nonsense_mediated_decay
ENST00000507635 (REEP2-007) 138444328-138445798 retained_intron
ENST00000510467 (REEP2-010) 138439168-138445118 retained_intron
ENST00000512126 (REEP2-004) 138439682-138445269 protein_coding
ENST00000613650 (REEP2-201) 138441016-138446964 protein_coding
CIL_0005D6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038773-ENSMUSG00000038555 CGP 10090 18:34777008-34847463
GeneTranscriptPositionBiotype
ENSMUSG00000038555 (Reep2)
receptor accessory protein 2 		ENSMUST00000043484 (Reep2-201) 34840589-34847463 protein_coding
ENSMUSG00000038773 (Kdm3b)
KDM3B lysine (K)-specific demethylase 3B 		ENSMUST00000043775 (Kdm3b-201) 34777008-34839370 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005D6_0001ENSG00000120733ENST00000314358ENST00000504095ENST00000505756ENST00000507996ENST00000508386ENST00000509468ENST00000510866ENST00000512928ENST00000542866ENSG00000132563ENST00000254901ENST00000378339ENST00000464751ENST00000503379ENST00000504163ENST00000506158ENST00000507511ENST00000507635ENST00000510467ENST00000512126ENST00000613650CIL_0005D6_0002ENSMUSG00000038555ENSMUST00000043484ENSMUSG00000038773ENSMUST00000043775
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005D6_0001ENSG00000120733ENST00000314358ENST00000507996ENST00000510866ENST00000542866ENSG00000132563ENST00000254901ENST00000378339ENST00000464751ENST00000503379ENST00000506158ENST00000507635ENST00000510467ENST00000512126ENST00000613650CIL_0005D6_0002ENSMUSG00000038555ENSMUST00000043484ENSMUSG00000038773ENSMUST00000043775
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120733 ENST00000314358 9.320±0.00 6.448±0.00 2.724±0.00 4.246±0.71 4.803±0.19 5.526±0.12 4.561±2.21 4.463±0.69 4.301±2.79 6.005±0.17 7.715±5.34 5.920±3.27 5.131±0.93 5.718±0.16
ENST00000504095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507996 N/A 5.039±0.00 3.826±0.00 2.915±0.50 5.133±1.12 3.834±0.64 1.997±0.00 N/A 5.676±0.00 3.493±0.00 5.396±0.67 5.945±2.93 N/A N/A
ENST00000508386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510866 N/A N/A N/A 0.695±0.00 N/A N/A N/A N/A N/A 1.025±0.00 0.924±0.00 1.752±0.00 1.290±0.00 3.573±0.00
ENST00000512928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542866 6.082±0.00 4.606±0.00 N/A 4.248±0.00 4.881±0.00 6.229±0.00 4.250±0.00 6.476±0.00 1.911±0.00 5.640±0.00 8.376±0.00 5.246±1.85 2.961±0.45 7.173±3.88
ENSG00000132563 ENST00000254901 N/A 0.260±0.00 N/A 13.461±0.00 4.897±0.00 N/A 0.836±0.00 N/A N/A N/A N/A 0.622±0.52 N/A N/A
ENST00000378339 0.620±0.00 N/A N/A 5.310±0.00 0.205±0.00 1.496±0.00 N/A N/A N/A N/A N/A 1.218±0.00 N/A 3.069±0.00
ENST00000464751 N/A 2.175±0.00 N/A N/A N/A N/A N/A 1.482±0.00 0.036±0.00 0.608±0.00 N/A N/A N/A N/A
ENST00000503379 N/A N/A N/A N/A N/A 1.721±0.00 N/A N/A N/A 0.766±0.00 2.472±0.00 N/A N/A N/A
ENST00000504163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A
ENST00000507511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507635 1.529±0.00 0.771±0.00 N/A 7.341±0.00 N/A N/A 1.184±0.00 N/A N/A N/A N/A 0.328±0.06 N/A 3.079±0.00
ENST00000510467 N/A N/A N/A 8.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512126 N/A N/A N/A N/A N/A 0.597±0.00 0.574±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000613650 3.165±0.00 0.150±0.00 N/A 24.560±19.97 2.501±0.00 6.164±0.00 0.940±0.82 N/A 0.267±0.25 N/A 1.098±0.00 2.710±1.83 0.363±0.16 5.226±2.74
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038555 ENSMUST00000043484 1.742±0.88 5.777±0.99 10.451±0.19 36.178±3.12 0.375±0.19 1.443±0.33 0.245±0.17 0.482±0.10 0.401±0.37 0.573±0.15 0.148±0.06 7.066±0.92 0.634±0.50 49.596±19.40
ENSMUSG00000038773 ENSMUST00000043775 7.211±1.74 6.120±1.52 12.766±0.73 10.703±3.06 7.017±1.37 8.350±1.80 2.986±0.66 5.239±0.68 4.334±1.94 9.760±1.05 2.488±1.39 9.262±1.45 5.680±2.52 3.659±1.05

Loading