C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: angiopoietin-like 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043726 Angptl6-001 ENSMUSG00000038742 10090 - 9:20873809-20879727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000043726
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000043726 4.083±0.00 7.117±1.34 5.780±4.64 6.826±0.67 3.336±0.55 3.132±0.54 2.398±0.31 16.377±5.63 3.183±0.88 5.283±0.89 9.314±7.18 0.548±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G7 CIL_0004G7_0002 CGP 9:20818504-20874307
CIL_0004G5 CIL_0004G5_0002 CGP 9:20868642-20879727
CIL_0001RI CIL_0001RI_0003 CGP 9:20873809-20892178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005576 IEA extracellular region
GO:0030141 IDA secretory granule
GO:0030154 IEA cell differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253109 ANGPTL6-001 protein_coding Homo_sapiens 0 852
ENST00000253110 C19orf66-001 protein_coding Homo_sapiens 2e-38 165
ENST00000397881 C19orf66-004 protein_coding Homo_sapiens 2e-38 165
ENST00000585919 C19orf66-003 retained_intron Homo_sapiens 2e-38 165
ENST00000586730 C19orf66-005 retained_intron Homo_sapiens 1e-38 165
ENST00000589181 ANGPTL6-003 protein_coding Homo_sapiens 0 486
ENST00000591813 C19orf66-002 protein_coding Homo_sapiens 1e-38 165
ENST00000592641 ANGPTL6-002 protein_coding Homo_sapiens 0 852

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