C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020265-ENSDARG00000022232 CGP 7955 3:55375899-55419633
GeneTranscriptPositionBiotype
ENSDARG00000020265 (angptl6)
angiopoietin-like 6 		ENSDART00000018044 (angptl6-001) 55375899-55396284 protein_coding
ENSDARG00000022232 (ppan)
peter pan homolog (Drosophila) 		ENSDART00000029387 (ppan-001) 55405603-55419633 protein_coding
CIL_0001RI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130812-ENSG00000243207 CGP 9606 19:10092338-10114780
GeneTranscriptPositionBiotype
ENSG00000130812 (ANGPTL6)
angiopoietin-like 6 		ENST00000253109 (ANGPTL6-001) 10092341-10102796 protein_coding
ENST00000586910 (ANGPTL6-004) 10094521-10096131 retained_intron
ENST00000589181 (ANGPTL6-003) 10092338-10096598 protein_coding
ENST00000592641 (ANGPTL6-002) 10092339-10102659 protein_coding
ENSG00000130813 (C19orf66)
chromosome 19 open reading frame 66 		ENST00000253110 (C19orf66-001) 10086130-10093245 protein_coding
ENST00000397881 (C19orf66-004) 10086852-10093242 protein_coding
ENST00000585919 (C19orf66-003) 10086297-10093252 retained_intron
ENST00000586730 (C19orf66-005) 10091590-10093244 retained_intron
ENST00000586889 (C19orf66-009) 10087044-10089901 nonsense_mediated_decay
ENST00000587609 (C19orf66-007) 10089447-10090047 retained_intron
ENST00000587710 (C19orf66-008) 10086348-10091545 nonsense_mediated_decay
ENST00000590378 (C19orf66-010) 10086787-10089993 protein_coding
ENST00000591813 (C19orf66-002) 10086340-10092927 protein_coding
ENST00000592551 (C19orf66-006) 10086122-10088260 retained_intron
ENST00000593131 (C19orf66-011) 10089657-10092325 protein_coding
CIL_0001RI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038742-ENSMUSG00000004100 CGP 10090 9:20873809-20892178
GeneTranscriptPositionBiotype
ENSMUSG00000004100 (Ppan)
peter pan homolog (Drosophila) 		ENSMUST00000004203 (Ppan-001) 20888175-20892178 protein_coding
ENSMUST00000135608 (Ppan-003) 20888250-20890341 retained_intron
ENSMUST00000145231 (Ppan-005) 20891207-20891682 retained_intron
ENSMUST00000147780 (Ppan-006) 20888285-20892178 retained_intron
ENSMUST00000153227 (Ppan-004) 20890638-20891354 retained_intron
ENSMUST00000157047 (Ppan-002) 20888267-20889682 retained_intron
ENSMUSG00000038742 (Angptl6)
angiopoietin-like 6 		ENSMUST00000043726 (Angptl6-001) 20873809-20879727 protein_coding
ENSMUSG00000038884 (A230050P20Rik)
RIKEN cDNA A230050P20 gene 		ENSMUST00000043911 (A230050P20Rik-001) 20868642-20874307 protein_coding
ENSMUST00000175820 (A230050P20Rik-002) 20868658-20874307 retained_intron
ENSMUST00000176142 (A230050P20Rik-004) 20868680-20870095 processed_transcript
ENSMUST00000176990 (A230050P20Rik-005) 20870772-20873121 retained_intron
ENSMUST00000177067 (A230050P20Rik-003) 20869277-20873771 retained_intron
ENSMUSG00000089571 (Gm23008)
predicted gene, 23008 		ENSMUST00000158946 (Gm23008-201) 20890757-20890836 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RI_0001ENSDARG00000020265ENSDART00000018044ENSDARG00000022232ENSDART00000029387CIL_0001RI_0002ENSG00000130812ENST00000253109ENST00000586910ENST00000589181ENST00000592641ENSG00000130813ENST00000253110ENST00000397881ENST00000585919ENST00000586730ENST00000586889ENST00000587609ENST00000587710ENST00000590378ENST00000591813ENST00000592551ENST00000593131CIL_0001RI_0003ENSMUSG00000004100ENSMUST00000004203ENSMUST00000135608ENSMUST00000145231ENSMUST00000147780ENSMUST00000153227ENSMUST00000157047ENSMUSG00000038742ENSMUST00000043726ENSMUSG00000038884ENSMUST00000043911ENSMUST00000175820ENSMUST00000176142ENSMUST00000176990ENSMUST00000177067ENSMUSG00000089571ENSMUST00000158946
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RI_0001ENSDARG00000020265ENSDART00000018044ENSDARG00000022232ENSDART00000029387CIL_0001RI_0002ENSG00000130812ENST00000253109ENST00000589181ENST00000592641ENSG00000130813ENST00000253110ENST00000585919ENST00000586730ENST00000587710ENST00000592551ENST00000593131CIL_0001RI_0003ENSMUSG00000004100ENSMUST00000004203ENSMUST00000135608ENSMUST00000145231ENSMUST00000147780ENSMUSG00000038742ENSMUST00000043726ENSMUSG00000038884ENSMUST00000043911ENSMUST00000175820ENSMUST00000176142ENSMUST00000176990ENSMUST00000177067ENSMUSG00000089571ENSMUST00000158946
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000020265 ENSDART00000018044 N/A N/A N/A 0.173±0.00 N/A N/A 0.050±0.03 1.409±0.77 0.345±0.00 N/A 0.032±0.00 N/A N/A N/A
ENSDARG00000022232 ENSDART00000029387 N/A N/A N/A 3.721±1.52 N/A N/A 7.185±1.32 11.431±11.75 3.865±0.00 N/A 4.118±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130812 ENST00000253109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.867±0.00 2.859±0.00
ENST00000586910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589181 5.001±0.00 12.752±0.00 N/A 6.476±4.00 3.037±1.57 5.454±0.00 1.184±0.92 8.588±0.00 38.636±0.00 12.484±0.00 N/A 8.740±5.95 6.227±0.00 8.059±0.00
ENST00000592641 N/A N/A N/A N/A N/A N/A N/A 3.557±0.00 N/A 0.510±0.00 0.540±0.00 N/A 3.177±0.00 N/A
ENSG00000130813 ENST00000253110 5.180±0.00 N/A 0.236±0.00 3.701±1.94 2.006±0.00 2.999±0.00 2.482±0.00 4.033±0.25 21.546±0.00 4.471±2.92 0.369±0.01 6.927±5.01 8.450±0.74 5.696±0.00
ENST00000397881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585919 N/A 12.121±0.00 0.697±0.00 3.445±2.69 2.258±1.58 2.404±1.71 0.427±0.18 3.791±0.00 9.042±8.20 9.240±0.00 N/A 6.067±4.15 2.904±0.61 2.338±0.50
ENST00000586730 N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A 0.214±0.00 N/A N/A N/A
ENST00000586889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.892±0.00 N/A 2.552±0.00
ENST00000590378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.222±0.00 N/A 0.552±0.00
ENST00000593131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.906±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004100 ENSMUST00000004203 12.810±5.63 18.382±3.79 14.824±2.08 15.243±5.96 16.077±6.77 15.263±1.68 3.244±0.66 7.767±0.46 21.515±14.22 9.427±1.54 3.121±0.81 31.179±9.57 30.690±18.84 11.599±2.88
ENSMUST00000135608 7.693±0.65 8.815±0.86 N/A 4.871±0.28 7.043±1.85 6.545±1.29 1.123±0.25 2.080±0.00 2.568±0.78 3.954±0.71 N/A 14.765±1.43 N/A N/A
ENSMUST00000145231 N/A N/A N/A 23.868±0.00 N/A N/A N/A N/A N/A N/A N/A 62.399±0.00 67.109±33.10 12.887±0.00
ENSMUST00000147780 3.520±0.99 4.579±0.00 4.639±1.20 N/A N/A N/A N/A N/A 9.420±4.35 N/A 1.123±0.00 N/A 3.472±0.00 N/A
ENSMUST00000153227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038742 ENSMUST00000043726 4.083±0.00 N/A 7.117±1.34 5.780±4.64 6.826±0.67 3.336±0.55 3.132±0.54 2.398±0.31 16.377±5.63 N/A 3.183±0.88 5.283±0.89 9.314±7.18 0.548±0.16
ENSMUSG00000038884 ENSMUST00000043911 9.355±0.00 11.394±4.39 N/A N/A 9.419±1.59 3.184±1.19 1.547±0.00 2.091±0.66 6.220±2.67 7.343±1.02 0.550±0.00 10.552±1.61 N/A N/A
ENSMUST00000175820 4.554±2.52 12.565±3.96 9.926±2.46 2.234±2.06 10.434±3.06 5.307±1.16 1.603±0.28 1.913±1.03 9.368±6.09 10.473±0.76 0.713±0.18 12.247±3.38 2.685±1.51 0.570±0.19
ENSMUST00000176142 N/A N/A N/A 29.613±0.00 N/A N/A N/A N/A N/A N/A N/A 14.125±0.00 5.091±2.57 0.450±0.00
ENSMUST00000176990 8.987±4.99 N/A 8.481±0.00 N/A 17.286±7.38 N/A 2.395±0.60 3.850±0.00 10.116±0.00 N/A N/A 10.062±0.82 4.829±0.00 0.089±0.00
ENSMUST00000177067 7.606±2.22 18.197±3.48 9.682±2.94 21.522±0.00 12.869±4.21 6.827±0.67 1.808±0.00 3.407±1.21 17.591±7.84 12.094±1.71 N/A 21.353±3.64 4.225±1.79 0.454±0.13
ENSMUSG00000089571 ENSMUST00000158946 27728.801±0.00 N/A N/A N/A 21127.000±0.00 27333.167±6867.99 N/A 31020.801±0.00 39467.300±13514.20 10131.635±2016.77 N/A N/A N/A 6568.721±6430.18

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