C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hedgehog acyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044190 Hhat-001 ENSMUSG00000037375 10090 - 1:192512828-192771213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044190 1.657±0.55 5.462±0.38 1.187±0.13 0.953±0.07 2.054±0.56 1.452±0.41 0.695±0.12 1.886±0.60 0.334±0.12 0.838±0.17 0.111±0.06 5.072±1.61 0.487±0.30 0.760±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040J CIL_00040J_0002 CGP 1:192190784-192771213
CIL_0008NP CIL_0008NP_0002 VISTA 1:192484315-193084989
CIL_0009DF CIL_0009DF_0002 VISTA 1:192489593-193091084
CIL_0007QS CIL_0007QS_0002 VISTA 1:192498093-193100700
CIL_0008NN CIL_0008NN_0002 VISTA 1:192506324-193107093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005783 IEA endoplasmic reticulum
GO:0007224 IMP smoothened signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane
GO:0016409 IMP palmitoyltransferase activity
GO:0018345 IMP protein palmitoylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261458 HHAT-001 protein_coding Homo_sapiens 0 1371
ENST00000367009 HHAT-002 protein_coding Homo_sapiens 0 667
ENST00000367010 HHAT-004 protein_coding Homo_sapiens 0 1371
ENST00000413764 HHAT-201 protein_coding Homo_sapiens 0 1371
ENST00000426968 HHAT-003 protein_coding Homo_sapiens 0 486
ENST00000537898 HHAT-202 protein_coding Homo_sapiens 0 953
ENST00000541565 HHAT-203 protein_coding Homo_sapiens 0 793
ENST00000545154 HHAT-204 protein_coding Homo_sapiens 0 1301
ENST00000545781 HHAT-205 protein_coding Homo_sapiens 0 281

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