C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hedgehog acyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545154 HHAT-204 ENSG00000054392 9606 + 1:210328906-210676296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungOvaryTestisENST00000545154
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Ovary Testis
ENST00000545154 0.495±0.00 0.229±0.00 0.355±0.09 0.407±0.00 0.378±0.00 1.789±0.00 1.015±0.00 0.591±0.00 0.847±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SY CIL_0007SY_0001 VISTA 1:209936500-210537428
CIL_0008VU CIL_0008VU_0001 VISTA 1:209960353-210563913
CIL_0008NN CIL_0008NN_0001 VISTA 1:209988044-210589005
CIL_0007QS CIL_0007QS_0001 VISTA 1:209991066-210593949
CIL_0009DF CIL_0009DF_0001 VISTA 1:210001167-210602348
CIL_0008NP CIL_0008NP_0001 VISTA 1:210011034-210611642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005783 IEA endoplasmic reticulum
GO:0007224 IEA smoothened signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane
GO:0016409 IEA palmitoyltransferase activity
GO:0018345 IEA protein palmitoylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044190 Hhat-001 protein_coding Mus_musculus 0 1301
ENSMUST00000128619 Hhat-002 protein_coding Mus_musculus 0 1208
ENSMUST00000154755 Hhat-005 protein_coding Mus_musculus 0 457
ENSMUST00000154203 Hhat-004 protein_coding Mus_musculus 0 335

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