C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H1d
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045301 Hist1h1d-001 ENSMUSG00000052565 10090 + 13:23555087-23555830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045301
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045301 0.511±0.08 0.085±0.01 0.848±0.25 1.004±0.36 0.334±0.21 1.696±0.39 0.205±0.07 0.148±0.11 2.881±1.57 0.405±0.05 0.455±0.19 0.693±0.35 0.959±0.86 0.190±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0000790 IEA nuclear chromatin
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005719 IEA nuclear euchromatin
GO:0006334 IEA nucleosome assembly
GO:0016584 IMP nucleosome positioning
GO:0031490 IEA chromatin DNA binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304218 HIST1H1E-001 protein_coding Homo_sapiens 0 536
ENST00000331442 HIST1H1B-001 protein_coding Homo_sapiens 0 375
ENST00000343677 HIST1H1C-001 protein_coding Homo_sapiens 0 394

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