C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046373 Iqsec3-001 ENSMUSG00000040797 10090 - 6:121372933-121473678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverPlacentaTestisENSMUST00000046373
Transcript ID Adipose Adrenal Brain Breast Colon Liver Placenta Testis
ENSMUST00000046373 0.145±0.00 0.830±0.23 7.520±4.32 0.051±0.00 0.183±0.08 0.026±0.00 0.020±0.01 0.068±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0045211 IDA postsynaptic membrane
GO:0060077 IDA inhibitory synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382841 IQSEC3-001 protein_coding Homo_sapiens 0 1694
ENST00000537151 IQSEC3-006 processed_transcript Homo_sapiens 0 268
ENST00000538799 IQSEC3P1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000538872 IQSEC3-002 protein_coding Homo_sapiens 0 2087
ENST00000544511 IQSEC3-005 processed_transcript Homo_sapiens 0 215
ENST00000571363 IQSEC3-001 protein_coding Homo_sapiens 0 1694
ENST00000575724 IQSEC3-002 protein_coding Homo_sapiens 0 1690
ENST00000620521 RP11-476I15.6-001 processed_pseudogene Homo_sapiens 0 496
ENST00000621764 IQSEC3-201 protein_coding Homo_sapiens 0 640

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