C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538872 IQSEC3-002 ENSG00000120645 9606 + 12:66765-178460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverTestisENST00000538872
Transcript ID Brain Breast Colon Heart Liver Testis
ENST00000538872 5.699±4.26 0.729±0.00 0.377±0.00 0.129±0.11 0.041±0.01 0.478±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA:IEA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0045211 IEA postsynaptic membrane
GO:0060077 IEA inhibitory synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046373 Iqsec3-001 protein_coding Mus_musculus 0 2087
ENSMUST00000152103 Iqsec3-002 nonsense_mediated_decay Mus_musculus 0 2087
ENSMUST00000129815 Iqsec3-003 nonsense_mediated_decay Mus_musculus 0 1694
ENSMUST00000151397 Iqsec3-004 retained_intron Mus_musculus 0 1676

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