C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spondin 1, extracellular matrix protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000576479 SPON1-001 ENSG00000262655 9606 + 11:13962689-14267884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000576479
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000576479 17.198±0.00 2.320±0.00 9.826±4.95 7.572±0.99 5.898±1.35 1.451±1.16 8.867±8.43 5.207±4.80 12.183±8.14 0.062±0.00 15.162±11.73 13.145±7.65 4.470±3.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PM CIL_0003PM_0001 CGP 11:13962689-14364506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0007155 IEA cell adhesion
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046687 Spon1-001 protein_coding Mus_musculus 0 3155

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