C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046890 Rassf7-001 ENSMUSG00000038618 10090 + 7:141215860-141218658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046890
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046890 3.676±1.25 2.723±1.06 27.865±7.56 5.909±1.90 4.777±1.71 22.609±3.60 0.483±0.30 10.602±1.51 11.045±4.54 15.045±1.62 0.210±0.10 8.153±3.28 13.165±7.73 8.908±3.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073Z CIL_00073Z_0002 CGP 7:141210043-141218658
CIL_0006S8 CIL_0006S8_0003 CGP 7:141215860-141262750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397582 RASSF7-001 protein_coding Homo_sapiens 0 850
ENST00000397583 RASSF7-003 protein_coding Homo_sapiens 0 878
ENST00000414138 RASSF7-005 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000431809 RASSF7-002 protein_coding Homo_sapiens 0 824
ENST00000454668 RASSF7-004 protein_coding Homo_sapiens 0 830
ENST00000531112 RASSF7-008 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000620201 RASSF7-201 protein_coding Homo_sapiens 0 832
ENST00000622100 RASSF7-202 protein_coding Homo_sapiens 0 872
ENST00000622905 RASSF7-203 protein_coding Homo_sapiens 0 824

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