C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006S8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000094325-ENSDARG00000075252 CGP 7955 25:26330591-26411808
GeneTranscriptPositionBiotype
ENSDARG00000075252 (phrf1)
PHD and ring finger domains 1 		ENSDART00000121617 (phrf1-201) 26374696-26410567 protein_coding
ENSDART00000150719 (phrf1-001) 26373935-26411808 protein_coding
ENSDARG00000079917 (rassf7a)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a 		ENSDART00000112330 (rassf7a-201) 26193635-26368037 protein_coding
ENSDART00000150537 (rassf7a-002) 26193443-26216993 protein_coding
ENSDART00000150666 (rassf7a-001) 26182384-26217786 protein_coding
ENSDARG00000094325 (RASSF7 (3 of 3))
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 		ENSDART00000136169 (RASSF7 (3 of 3)-201) 26352290-26360817 protein_coding
ENSDART00000150593 (RASSF7 (3 of 3)-001) 26330591-26368151 protein_coding
CIL_0006S8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099849-ENSG00000070047 CGP 9606 11:560404-612222
GeneTranscriptPositionBiotype
ENSG00000070047 (PHRF1)
PHD and ring finger domains 1 		ENST00000264555 (PHRF1-001) 576486-612222 protein_coding
ENST00000413872 (PHRF1-007) 576521-611964 protein_coding
ENST00000416188 (PHRF1-008) 576521-611964 protein_coding
ENST00000532550 (PHRF1-005) 601657-606842 retained_intron
ENST00000533464 (PHRF1-003) 576521-611964 protein_coding
ENST00000534320 (PHRF1-004) 576486-612043 nonsense_mediated_decay
ENSG00000099849 (RASSF7)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 		ENST00000397582 (RASSF7-001) 560956-564012 protein_coding
ENST00000397583 (RASSF7-003) 561052-564018 protein_coding
ENST00000414138 (RASSF7-005) 560971-563980 nonsense_mediated_decay
ENST00000431809 (RASSF7-002) 560404-563993 protein_coding
ENST00000454668 (RASSF7-004) 561450-564021 protein_coding
ENST00000524468 (RASSF7-006) 560987-562456 processed_transcript
ENST00000528736 (RASSF7-007) 561547-562205 protein_coding
ENST00000531112 (RASSF7-008) 562385-563685 nonsense_mediated_decay
ENSG00000185522 (LMNTD2)
lamin tail domain containing 2 		ENST00000329451 (LMNTD2-001) 554864-560779 protein_coding
ENST00000441853 (LMNTD2-004) 556926-560730 protein_coding
ENST00000469990 (LMNTD2-002) 554855-556420 retained_intron
ENST00000486629 (LMNTD2-005) 557399-559382 protein_coding
ENST00000492515 (LMNTD2-003) 558476-560143 retained_intron
ENSG00000247095 (MIR210HG)
MIR210 host gene (non-protein coding) 		ENST00000500447 (MIR210HG-001) 565660-568420 lincRNA
ENST00000528245 (MIR210HG-002) 567083-568408 lincRNA
ENST00000533920 (MIR210HG-003) 567144-568457 lincRNA
ENST00000534540 (MIR210HG-004) 567526-568369 lincRNA
CIL_0006S8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038618-ENSMUSG00000038611 CGP 10090 7:141215860-141262750
GeneTranscriptPositionBiotype
ENSMUSG00000025498 (Irf7)
interferon regulatory factor 7 		ENSMUST00000026571 (Irf7-001) 141263183-141266481 protein_coding
ENSMUST00000097952 (Irf7-002) 141263184-141266423 protein_coding
ENSMUST00000106023 (Irf7-003) 141262706-141266421 protein_coding
ENSMUST00000123525 (Irf7-011) 141263432-141265292 protein_coding
ENSMUST00000127161 (Irf7-008) 141265215-141265984 retained_intron
ENSMUST00000127223 (Irf7-012) 141263791-141265131 retained_intron
ENSMUST00000131399 (Irf7-007) 141263973-141266044 processed_transcript
ENSMUST00000146373 (Irf7-006) 141265376-141266421 processed_transcript
ENSMUST00000148414 (Irf7-010) 141264223-141265473 retained_intron
ENSMUST00000155744 (Irf7-004) 141263187-141266422 retained_intron
ENSMUST00000156938 (Irf7-009) 141264800-141265707 retained_intron
ENSMUSG00000038611 (Phrf1)
PHD and ring finger domains 1 		ENSMUST00000106027 (Phrf1-001) 141228789-141262626 protein_coding
ENSMUST00000122143 (Phrf1-009) 141243499-141262595 protein_coding
ENSMUST00000122868 (Phrf1-002) 141256003-141257829 retained_intron
ENSMUST00000130687 (Phrf1-007) 141260397-141262747 protein_coding
ENSMUST00000130852 (Phrf1-006) 141259658-141260587 processed_transcript
ENSMUST00000132540 (Phrf1-005) 141254914-141258069 processed_transcript
ENSMUST00000134057 (Phrf1-004) 141234201-141247317 protein_coding
ENSMUST00000142572 (Phrf1-003) 141259190-141262750 protein_coding
ENSMUST00000144250 (Phrf1-008) 141261679-141262700 processed_transcript
ENSMUST00000144632 (Phrf1-011) 141256004-141256886 retained_intron
ENSMUST00000155123 (Phrf1-010) 141228784-141262742 nonsense_mediated_decay
ENSMUSG00000038618 (Rassf7)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 		ENSMUST00000046890 (Rassf7-001) 141215860-141218658 protein_coding
ENSMUST00000127613 (Rassf7-002) 141215875-141218000 processed_transcript
ENSMUST00000133763 (Rassf7-004) 141215978-141217478 protein_coding
ENSMUST00000141804 (Rassf7-006) 141216635-141217605 protein_coding
ENSMUST00000148975 (Rassf7-007) 141216700-141217713 protein_coding
ENSMUST00000149548 (Rassf7-003) 141215899-141217513 processed_transcript
ENSMUST00000153081 (Rassf7-005) 141216203-141217472 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S8_0001ENSDARG00000075252ENSDART00000121617ENSDART00000150719ENSDARG00000079917ENSDART00000112330ENSDART00000150537ENSDART00000150666ENSDARG00000094325ENSDART00000136169ENSDART00000150593CIL_0006S8_0002ENSG00000070047ENST00000264555ENST00000413872ENST00000416188ENST00000532550ENST00000533464ENST00000534320ENSG00000099849ENST00000397582ENST00000397583ENST00000414138ENST00000431809ENST00000454668ENST00000524468ENST00000528736ENST00000531112ENSG00000185522ENST00000329451ENST00000441853ENST00000469990ENST00000486629ENST00000492515ENSG00000247095ENST00000500447ENST00000528245ENST00000533920ENST00000534540CIL_0006S8_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S8_0001ENSDARG00000075252ENSDART00000121617ENSDART00000150719ENSDARG00000079917ENSDART00000112330ENSDART00000150666ENSDARG00000094325ENSDART00000136169ENSDART00000150593CIL_0006S8_0002ENSG00000070047ENST00000264555ENST00000413872ENST00000416188ENST00000533464ENST00000534320ENSG00000099849ENST00000397582ENST00000397583ENST00000414138ENST00000431809ENST00000454668ENST00000524468ENST00000528736ENST00000531112ENSG00000185522ENST00000329451ENST00000441853ENST00000469990ENST00000486629ENSG00000247095ENST00000500447ENST00000528245ENST00000533920ENST00000534540CIL_0006S8_0003ENSMUSG00000025498ENSMUST00000026571ENSMUST00000097952ENSMUST00000106023ENSMUST00000131399ENSMUST00000155744ENSMUSG00000038611ENSMUST00000106027ENSMUST00000122143ENSMUST00000130687ENSMUST00000142572ENSMUST00000155123ENSMUSG00000038618ENSMUST00000046890ENSMUST00000127613ENSMUST00000141804ENSMUST00000149548ENSMUST00000153081
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075252 ENSDART00000121617 N/A N/A N/A 2.416±1.01 N/A N/A 1.306±0.00 3.800±0.00 0.687±0.00 N/A 0.937±0.00 N/A N/A N/A
ENSDART00000150719 N/A N/A N/A 6.173±1.54 N/A N/A 6.607±2.54 3.336±2.24 N/A N/A 1.079±0.00 N/A N/A N/A
ENSDARG00000079917 ENSDART00000112330 N/A N/A N/A 0.374±0.00 N/A N/A N/A 0.136±0.00 N/A N/A 0.065±0.00 N/A N/A N/A
ENSDART00000150537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150666 N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A 0.171±0.00 N/A N/A N/A
ENSDARG00000094325 ENSDART00000136169 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.035±0.00 N/A 0.219±0.00 N/A N/A N/A
ENSDART00000150593 N/A N/A N/A 0.362±0.00 N/A N/A 0.160±0.10 0.879±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070047 ENST00000264555 1.998±0.00 N/A N/A 0.621±0.35 0.348±0.00 0.726±0.00 N/A 1.125±0.15 N/A N/A 3.924±0.00 5.308±3.46 3.390±1.58 N/A
ENST00000413872 N/A 4.146±0.00 N/A N/A 1.639±0.00 0.748±0.00 1.861±0.00 N/A N/A 5.089±0.00 2.117±0.00 2.362±0.00 2.819±0.49 N/A
ENST00000416188 N/A N/A N/A 0.749±0.00 N/A 1.979±0.00 1.358±0.00 1.356±0.00 N/A 1.321±0.21 3.092±0.00 1.707±0.00 4.450±0.00 2.707±0.00
ENST00000532550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533464 6.952±0.00 2.917±0.00 N/A 4.403±0.00 4.723±0.00 3.208±0.00 N/A 4.661±0.00 5.363±0.00 N/A 1.036±0.92 4.899±1.15 2.029±0.59 6.624±2.08
ENST00000534320 N/A 4.828±0.00 N/A N/A 2.333±0.00 1.760±0.00 1.204±1.12 1.474±0.00 1.768±0.00 N/A 1.959±0.00 8.732±0.00 4.725±0.00 5.844±1.66
ENSG00000099849 ENST00000397582 1.563±0.00 N/A 0.131±0.00 0.593±0.38 1.700±0.00 2.087±0.00 0.982±0.00 16.960±0.00 10.329±0.00 11.665±0.00 N/A 4.904±3.17 9.837±2.19 1.997±0.00
ENST00000397583 N/A N/A N/A N/A 0.124±0.00 N/A 0.146±0.00 13.164±0.00 2.427±2.37 9.830±0.00 0.064±0.00 1.032±0.00 N/A N/A
ENST00000414138 N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A 12.203±0.00 N/A N/A
ENST00000431809 N/A N/A N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454668 N/A 0.981±0.00 N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A 2.993±1.89 1.887±0.00 1.311±0.00
ENST00000524468 N/A N/A N/A N/A N/A 0.955±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528736 N/A N/A N/A N/A N/A 0.645±0.00 N/A 0.883±0.00 N/A N/A N/A 0.330±0.00 N/A N/A
ENST00000531112 N/A N/A N/A 0.247±0.00 0.910±0.00 N/A N/A N/A N/A N/A 0.650±0.00 N/A N/A N/A
ENSG00000185522 ENST00000329451 N/A 1.881±0.00 N/A N/A N/A N/A N/A 1.222±0.94 N/A 2.132±0.00 N/A 2.556±0.95 0.396±0.22 8.569±4.56
ENST00000441853 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A
ENST00000469990 N/A N/A N/A 0.225±0.00 N/A 0.652±0.00 N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A
ENST00000486629 N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247095 ENST00000500447 0.411±0.00 0.315±0.00 N/A 0.112±0.00 0.123±0.00 N/A 0.047±0.00 0.228±0.00 0.215±0.04 0.192±0.00 0.110±0.00 0.220±0.14 0.447±0.22 0.188±0.00
ENST00000528245 N/A N/A N/A 1.067±0.00 N/A 1.631±0.00 0.586±0.44 1.699±0.00 0.589±0.00 1.516±0.00 1.111±0.00 1.513±1.08 1.087±0.52 1.177±0.00
ENST00000533920 N/A N/A N/A 0.511±0.00 0.856±0.00 0.631±0.00 0.587±0.00 N/A 0.557±0.00 N/A N/A 1.025±0.23 1.692±0.64 0.844±0.18
ENST00000534540 N/A N/A N/A N/A N/A 1.385±0.00 N/A 1.801±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025498 ENSMUST00000026571 18.701±9.13 21.056±0.00 8.237±1.37 N/A 21.400±7.11 41.896±11.44 4.551±0.91 13.490±4.24 13.972±7.82 7.993±0.71 N/A 15.711±4.19 11.553±0.18 N/A
ENSMUST00000097952 N/A N/A N/A N/A 5.996±0.00 N/A N/A N/A 7.480±3.30 N/A N/A N/A N/A N/A
ENSMUST00000106023 N/A N/A N/A N/A N/A 19.281±5.45 N/A N/A 5.645±2.54 N/A N/A N/A N/A N/A
ENSMUST00000123525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131399 N/A N/A N/A N/A 17.312±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155744 10.204±1.21 19.076±5.25 5.060±0.00 N/A 15.091±5.04 29.183±5.46 4.412±1.66 8.485±0.85 11.404±6.41 8.231±1.79 N/A 10.844±2.14 32.914±0.00 N/A
ENSMUST00000156938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038611 ENSMUST00000106027 5.517±2.72 8.962±1.34 3.777±1.58 9.303±5.54 4.624±2.04 7.310±0.73 2.124±0.33 4.080±0.48 4.597±2.08 5.362±0.74 2.188±0.89 8.084±7.07 16.855±8.34 6.744±6.64
ENSMUST00000122143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.579±0.00 4.010±0.00 N/A N/A
ENSMUST00000122868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130687 N/A N/A N/A 2.842±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 51.565±0.52 N/A
ENSMUST00000130852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142572 N/A N/A N/A 3.578±1.91 N/A N/A N/A N/A N/A N/A 1.986±0.34 11.042±0.00 16.965±0.00 15.686±0.00
ENSMUST00000144250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.316±0.11 6.913±0.70 8.772±2.17 N/A
ENSMUSG00000038618 ENSMUST00000046890 3.676±1.25 2.723±1.06 27.865±7.56 5.909±1.90 4.777±1.71 22.609±3.60 0.483±0.30 10.602±1.51 11.045±4.54 15.045±1.62 0.210±0.10 8.153±3.28 13.165±7.73 8.908±3.79
ENSMUST00000127613 N/A 2.517±0.79 N/A 2.251±0.78 2.215±0.36 24.570±8.63 N/A 5.094±0.59 6.623±3.62 N/A 0.172±0.00 6.413±1.68 4.060±0.00 N/A
ENSMUST00000133763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141804 3.485±1.64 N/A 24.437±8.98 N/A 2.236±0.00 27.891±0.00 N/A 6.805±0.00 6.628±0.37 N/A N/A 4.585±1.71 3.299±0.00 6.047±0.05
ENSMUST00000148975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149548 N/A 2.699±0.00 N/A 1.113±0.00 N/A N/A 0.238±0.07 N/A N/A N/A 0.180±0.04 3.680±0.00 11.911±2.93 8.912±0.00
ENSMUST00000153081 N/A N/A N/A N/A N/A N/A N/A N/A 6.138±0.00 N/A 0.254±0.00 2.904±0.00 6.803±0.02 N/A

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