C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397582 RASSF7-001 ENSG00000099849 9606 + 11:560956-564012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000397582
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000397582 1.563±0.00 0.131±0.00 0.593±0.38 1.700±0.00 2.087±0.00 0.982±0.00 16.960±0.00 10.329±0.00 11.665±0.00 4.904±3.17 9.837±2.19 1.997±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OU CIL_0003OU_0001 CGP 11:537527-560779
CIL_00073Z CIL_00073Z_0001 CGP 11:554855-564021
CIL_0006S8 CIL_0006S8_0002 CGP 11:560404-612222

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046890 Rassf7-001 protein_coding Mus_musculus 0 850
ENSMUST00000127613 Rassf7-002 processed_transcript Mus_musculus 0 647
ENSMUST00000141804 Rassf7-006 protein_coding Mus_musculus 0 630
ENSMUST00000133763 Rassf7-004 protein_coding Mus_musculus 0 518
ENSMUST00000153081 Rassf7-005 protein_coding Mus_musculus 0 516
ENSMUST00000149548 Rassf7-003 processed_transcript Mus_musculus 0 414
ENSDART00000131210 rassf7b-004 protein_coding Danio_rerio 2e-21 108
ENSDART00000137059 rassf7b-003 protein_coding Danio_rerio 2e-21 108
ENSDART00000141934 rassf7b-002 protein_coding Danio_rerio 2e-21 108
ENSDART00000025451 rassf7b-001 protein_coding Danio_rerio 2e-21 108

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