C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patched domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047720 Ptchd2-001 ENSMUSG00000041544 10090 - 4:148240264-148287965 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047720 0.017±0.01 0.191±0.06 0.020±0.01 5.679±2.26 0.012±0.00 0.064±0.02 0.005±0.00 0.012±0.01 0.008±0.00 0.010±0.01 0.024±0.01 0.045±0.02 0.021±0.02 0.202±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0008158 IEA hedgehog receptor activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294484 PTCHD2-001 protein_coding Homo_sapiens 0 4048
ENST00000304391 PTCHD2-002 protein_coding Homo_sapiens 0 922

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