C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047761 Cldn10-003 ENSMUSG00000022132 10090 + 14:118787908-118874524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyMuscleOvaryPlacentaENSMUST00000047761
Transcript ID Brain Breast Colon Kidney Muscle Ovary Placenta
ENSMUST00000047761 4.571±0.00 1.608±0.00 0.090±0.00 121.660±0.00 0.078±0.03 5.088±2.53 0.212±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F4 CIL_0002F4_0002 CGP 14:118482692-118875489
CIL_0000O1 CIL_0000O1_0002 CGP 14:118787908-118925314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005923 ISS tight junction
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376873 CLDN10-001 protein_coding Homo_sapiens 0 952

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