C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022132 Cldn10 10090 + 14:118787908-118875489 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047761 Cldn10-003 118787908-118874524 protein_coding
  ENSMUST00000071546 Cldn10-002 118787918-118874525 protein_coding
  ENSMUST00000100314 Cldn10-001 118854732-118875489 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047761ENSMUST00000071546ENSMUST00000100314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047761 N/A N/A N/A 4.571±0.00 1.608±0.00 0.090±0.00 N/A 121.660±0.00 N/A N/A 0.078±0.03 5.088±2.53 0.212±0.23 N/A
ENSMUST00000071546 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A 0.026±0.00 N/A 0.056±0.00 N/A
ENSMUST00000100314 3.423±3.06 0.540±0.21 3.494±0.97 1.249±0.00 3.843±0.78 0.358±0.11 0.227±0.17 24.528±3.76 0.074±0.01 7.670±0.58 N/A 6.571±3.90 0.126±0.04 0.251±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F4 CIL_0002F4_0002 CGP 14:118482692-118875489
CIL_0000O1 CIL_0000O1_0002 CGP 14:118787908-118925314

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005923 ISS tight junction
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005377 cldn10b claudin 10b protein_coding Danio_rerio
ENSDARG00000058937 cldn10a claudin 10a protein_coding Danio_rerio
ENSG00000134873 CLDN10 claudin 10 protein_coding Homo_sapiens

Loading