C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002F4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125257-ENSG00000134873 CGP 9606 13:95019829-95579759
GeneTranscriptPositionBiotype
ENSG00000125257 (ABCC4)
ATP-binding cassette, sub-family C (CFTR/MRP), member 4 		ENST00000376887 (ABCC4-001) 95019829-95301429 protein_coding
ENST00000467685 (ABCC4-005) 95074216-95076019 processed_transcript
ENST00000471041 (ABCC4-003) 95043680-95055819 processed_transcript
ENST00000474158 (ABCC4-004) 95071730-95073776 processed_transcript
ENST00000484109 (ABCC4-002) 95043320-95044329 processed_transcript
ENST00000536256 (ABCC4-006) 95095769-95301433 protein_coding
ENSG00000134873 (CLDN10)
claudin 10 		ENST00000299339 (CLDN10-002) 95552725-95578247 protein_coding
ENST00000376855 (CLDN10-003) 95560150-95560938 protein_coding
ENST00000376873 (CLDN10-001) 95433604-95579759 protein_coding
ENSG00000134874 (DZIP1)
DAZ interacting zinc finger protein 1 		ENST00000347108 (DZIP1-201) 95578203-95643263 protein_coding
ENST00000361156 (DZIP1-202) 95578203-95643263 protein_coding
ENST00000361396 (DZIP1-001) 95578202-95644690 protein_coding
ENST00000376829 (DZIP1-003) 95581952-95644703 protein_coding
ENST00000466027 (DZIP1-002) 95637009-95644666 processed_transcript
ENST00000466569 (DZIP1-004) 95599357-95642029 nonsense_mediated_decay
ENST00000479518 (DZIP1-006) 95584578-95587674 processed_transcript
ENST00000485031 (DZIP1-005) 95581970-95588133 processed_transcript
ENSG00000223298 (RNY3P8)
RNA, Ro-associated Y3 pseudogene 8 		ENST00000411366 (RNY3P8-201) 95310830-95310955 misc_RNA
ENSG00000223392 (CLDN10-AS1)
CLDN10 antisense RNA 1 		ENST00000416909 (CLDN10-AS1-001) 95479444-95533910 antisense
ENSG00000271492 (MEMO1P5)
mediator of cell motility 1 pseudogene 5 		ENST00000604810 (MEMO1P5-001) 95394049-95394454 processed_pseudogene
CIL_0002F4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032849-ENSMUSG00000022132 CGP 10090 14:118482692-118875489
GeneTranscriptPositionBiotype
ENSMUSG00000022132 (Cldn10)
claudin 10 		ENSMUST00000047761 (Cldn10-003) 118787908-118874524 protein_coding
ENSMUST00000071546 (Cldn10-002) 118787918-118874525 protein_coding
ENSMUST00000100314 (Cldn10-001) 118854732-118875489 protein_coding
ENSMUSG00000032849 (Abcc4)
ATP-binding cassette, sub-family C (CFTR/MRP), member 4 		ENSMUST00000036554 (Abcc4-201) 118482692-118706219 protein_coding
ENSMUST00000166646 (Abcc4-202) 118482692-118706219 protein_coding
ENSMUSG00000088105 (Gm22379)
predicted gene, 22379 		ENSMUST00000157480 (Gm22379-201) 118775152-118775282 snoRNA
ENSMUSG00000098433 (Mir6391)
microRNA 6391 		ENSMUST00000184391 (Mir6391-201) 118592369-118592472 miRNA
ENSMUSG00000098630 (Gm27198)
predicted gene 27198 		ENSMUST00000184172 (Gm27198-001) 118727794-118735145 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F4_0001ENSG00000125257ENST00000376887ENST00000467685ENST00000471041ENST00000474158ENST00000484109ENST00000536256ENSG00000134873ENST00000299339ENST00000376855ENST00000376873ENSG00000134874ENST00000347108ENST00000361156ENST00000361396ENST00000376829ENST00000466027ENST00000466569ENST00000479518ENST00000485031ENSG00000223298ENST00000411366ENSG00000223392ENST00000416909ENSG00000271492ENST00000604810CIL_0002F4_0002ENSMUSG00000022132ENSMUST00000047761ENSMUST00000071546ENSMUST00000100314ENSMUSG00000032849ENSMUST00000036554ENSMUST00000166646ENSMUSG00000088105ENSMUST00000157480ENSMUSG00000098433ENSMUST00000184391ENSMUSG00000098630ENSMUST00000184172
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F4_0001ENSG00000125257ENST00000376887ENST00000536256ENSG00000134873ENST00000299339ENSG00000134874ENST00000347108ENST00000361156ENST00000361396ENST00000376829ENST00000466027ENST00000466569ENST00000485031ENSG00000223298ENST00000411366ENSG00000223392ENST00000416909ENSG00000271492ENST00000604810CIL_0002F4_0002ENSMUSG00000022132ENSMUST00000047761ENSMUST00000071546ENSMUST00000100314ENSMUSG00000032849ENSMUST00000036554ENSMUST00000166646ENSMUSG00000088105ENSMUST00000157480ENSMUSG00000098433ENSMUST00000184391ENSMUSG00000098630ENSMUST00000184172
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125257 ENST00000376887 0.719±0.00 1.661±0.00 0.735±0.00 0.839±0.53 0.378±0.00 2.605±0.42 0.906±0.00 2.679±2.64 0.712±0.61 1.740±0.12 2.247±0.00 3.286±1.23 0.413±0.24 2.011±1.03
ENST00000467685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536256 N/A N/A N/A N/A N/A N/A N/A 0.863±0.00 0.069±0.00 N/A 0.478±0.00 2.260±0.56 N/A N/A
ENSG00000134873 ENST00000299339 N/A N/A 11.422±0.00 17.479±6.12 N/A N/A N/A 47.204±0.00 1.149±0.00 6.126±0.00 N/A 3.786±0.00 N/A N/A
ENST00000376855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134874 ENST00000347108 0.251±0.00 N/A 2.027±0.00 1.477±0.00 0.308±0.00 0.720±0.63 0.208±0.13 2.374±2.25 0.481±0.00 N/A N/A 1.218±0.60 0.400±0.12 2.742±0.00
ENST00000361156 N/A 0.583±0.00 N/A N/A N/A N/A 0.052±0.00 N/A 0.116±0.00 N/A N/A 0.974±0.00 N/A N/A
ENST00000361396 N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A 0.634±0.00 N/A N/A N/A N/A
ENST00000376829 2.269±0.00 2.865±0.00 N/A 4.926±2.23 1.496±0.07 4.145±3.29 0.672±0.60 2.670±2.57 1.608±1.43 2.287±0.93 0.608±0.00 5.517±4.76 2.218±1.37 21.002±5.87
ENST00000466027 N/A N/A N/A N/A N/A N/A N/A 0.337±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466569 N/A N/A N/A N/A 0.921±0.00 0.358±0.00 N/A 0.310±0.00 1.420±0.00 N/A N/A N/A N/A 31.985±0.00
ENST00000479518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.240±0.00
ENSG00000223298 ENST00000411366 N/A 0.283±0.00 N/A N/A N/A 1.506±0.00 N/A N/A 0.129±0.00 N/A N/A 29.947±39.19 N/A 0.305±0.18
ENSG00000223392 ENST00000416909 N/A 0.296±0.00 N/A N/A N/A N/A N/A 0.450±0.00 N/A N/A N/A 0.157±0.04 N/A 0.024±0.00
ENSG00000271492 ENST00000604810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022132 ENSMUST00000047761 N/A N/A N/A 4.571±0.00 1.608±0.00 0.090±0.00 N/A 121.660±0.00 N/A N/A 0.078±0.03 5.088±2.53 0.212±0.23 N/A
ENSMUST00000071546 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A 0.026±0.00 N/A 0.056±0.00 N/A
ENSMUST00000100314 3.423±3.06 0.540±0.21 3.494±0.97 1.249±0.00 3.843±0.78 0.358±0.11 0.227±0.17 24.528±3.76 0.074±0.01 7.670±0.58 N/A 6.571±3.90 0.126±0.04 0.251±0.23
ENSMUSG00000032849 ENSMUST00000036554 4.024±1.88 3.168±0.70 16.431±6.98 0.494±0.04 2.254±0.42 2.943±0.21 2.231±0.30 12.108±3.75 0.820±0.40 3.079±0.58 2.119±0.57 3.368±1.09 3.547±3.19 0.411±0.15
ENSMUST00000166646 0.627±0.00 N/A N/A 0.949±0.00 N/A N/A N/A N/A 0.202±0.00 N/A 0.914±0.10 2.467±0.95 0.670±0.22 0.543±0.00
ENSMUSG00000088105 ENSMUST00000157480 N/A N/A N/A N/A N/A N/A N/A N/A 14.469±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000098433 ENSMUST00000184391 N/A N/A N/A 37.792±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098630 ENSMUST00000184172 N/A N/A N/A 0.005±0.00 N/A N/A 0.050±0.02 N/A 0.012±0.00 N/A N/A 0.017±0.00 0.008±0.00 1.165±0.54

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