C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047857 Fbxl5-001 ENSMUSG00000039753 10090 - 5:43744616-43782149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047857
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047857 18.199±2.00 32.154±4.08 19.173±1.94 16.753±2.48 17.311±3.45 18.654±2.29 9.207±2.04 19.314±3.38 11.808±3.30 23.689±3.00 10.498±2.28 16.860±5.88 19.765±5.01 27.516±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026J CIL_00026J_0002 CGP 5:43662379-43821639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 ISS iron ion binding
GO:0016567 ISS protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex
GO:0031146 ISS SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0048471 ISS perinuclear region of cytoplasm
GO:0055072 ISS iron ion homeostasis
GO:1903364 IMP positive regulation of cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341285 FBXL5-001 protein_coding Homo_sapiens 0 3358
ENST00000412094 FBXL5-002 protein_coding Homo_sapiens 0 2987
ENST00000503196 FBXL5-010 protein_coding Homo_sapiens 0 628
ENST00000504837 FBXL5-006 retained_intron Homo_sapiens 0 595
ENST00000507700 FBXL5-003 retained_intron Homo_sapiens 0 2706
ENST00000509314 FBXL5-011 protein_coding Homo_sapiens 0 627
ENST00000510802 FBXL5-013 protein_coding Homo_sapiens 0 455
ENST00000511441 FBXL5-004 nonsense_mediated_decay Homo_sapiens 0 2772
ENST00000512066 FBXL5-007 protein_coding Homo_sapiens 0 706
ENST00000513163 FBXL5-005 protein_coding Homo_sapiens 0 2615

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