C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341285 FBXL5-001 ENSG00000118564 9606 - 4:15604539-15655412 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341285 6.808±0.00 6.891±0.00 6.425±0.00 9.827±1.55 10.293±4.46 4.216±0.00 5.387±1.59 7.347±0.00 5.476±3.32 5.992±0.90 4.307±0.00 16.001±4.50 6.887±0.75 12.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026J CIL_00026J_0001 CGP 4:15469865-15681679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 NAS ubiquitin ligase complex
GO:0004842 NAS ubiquitin-protein transferase activity
GO:0005506 IDA iron ion binding
GO:0005515 IPI:IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055072 IMP iron ion homeostasis
GO:1903364 IEA positive regulation of cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047857 Fbxl5-001 protein_coding Mus_musculus 0 3358
ENSMUST00000114047 Fbxl5-002 protein_coding Mus_musculus 0 3059
ENSMUST00000119523 Fbxl5-003 protein_coding Mus_musculus 0 2987
ENSMUST00000141902 Fbxl5-004 protein_coding Mus_musculus 0 2615
ENSMUST00000087465 Fbxl5-005 protein_coding Mus_musculus 0 2542
ENSMUST00000121736 Fbxl5-006 protein_coding Mus_musculus 0 2117
ENSMUST00000143316 Fbxl5-008 retained_intron Mus_musculus 0 1271
ENSMUST00000124421 Fbxl5-007 retained_intron Mus_musculus 0 1127
ENSMUST00000140469 Fbxl5-009 retained_intron Mus_musculus 0 556
ENSMUST00000124610 Fbxl5-010 protein_coding Mus_musculus 0 440

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