C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000048342-ENSG00000118564 CGP 9606 4:15469865-15681679
GeneTranscriptPositionBiotype
ENSG00000048342 (CC2D2A)
coiled-coil and C2 domain containing 2A 		ENST00000389652 (CC2D2A-010) 15479223-15601546 protein_coding
ENST00000424120 (CC2D2A-201) 15469865-15601557 protein_coding
ENST00000438599 (CC2D2A-202) 15469865-15482262 protein_coding
ENST00000503292 (CC2D2A-002) 15469930-15601557 protein_coding
ENST00000503658 (CC2D2A-006) 15470013-15481376 protein_coding
ENST00000506643 (CC2D2A-012) 15536985-15601552 nonsense_mediated_decay
ENST00000507954 (CC2D2A-013) 15469903-15481290 protein_coding
ENST00000510220 (CC2D2A-017) 15527619-15533453 retained_intron
ENST00000511544 (CC2D2A-004) 15469891-15482317 protein_coding
ENST00000512202 (CC2D2A-014) 15550738-15557373 retained_intron
ENST00000512702 (CC2D2A-003) 15469891-15537076 protein_coding
ENST00000513035 (CC2D2A-015) 15595872-15597465 retained_intron
ENST00000513811 (CC2D2A-008) 15469896-15543961 processed_transcript
ENST00000514039 (CC2D2A-016) 15589627-15601371 processed_transcript
ENST00000514450 (CC2D2A-009) 15469921-15511675 retained_intron
ENST00000515124 (CC2D2A-005) 15469912-15482259 protein_coding
ENSG00000118564 (FBXL5)
F-box and leucine-rich repeat protein 5 		ENST00000341285 (FBXL5-001) 15604539-15655412 protein_coding
ENST00000412094 (FBXL5-002) 15605006-15655382 protein_coding
ENST00000503196 (FBXL5-010) 15638539-15659867 protein_coding
ENST00000504837 (FBXL5-006) 15636373-15655295 retained_intron
ENST00000507700 (FBXL5-003) 15612013-15655341 retained_intron
ENST00000507899 (FBXL5-008) 15640841-15681554 protein_coding
ENST00000509314 (FBXL5-011) 15638549-15659864 protein_coding
ENST00000510802 (FBXL5-013) 15638690-15681567 protein_coding
ENST00000511441 (FBXL5-004) 15605006-15655341 nonsense_mediated_decay
ENST00000512066 (FBXL5-007) 15636590-15644678 protein_coding
ENST00000513163 (FBXL5-005) 15605006-15644649 protein_coding
ENST00000514541 (FBXL5-009) 15659731-15681679 processed_transcript
ENST00000515679 (FBXL5-012) 15640849-15681619 protein_coding
ENSG00000273133 (RP11-799M12.2)
 ENST00000609724 (RP11-799M12.2-001) 15563698-15564253 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00026J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039765-ENSMUSG00000039753 CGP 10090 5:43662379-43821639
GeneTranscriptPositionBiotype
ENSMUSG00000029082 (Bst1)
bone marrow stromal cell antigen 1 		ENSMUST00000101237 (Bst1-001) 43818893-43843247 protein_coding
ENSMUST00000118126 (Bst1-002) 43821502-43843247 protein_coding
ENSMUST00000125838 (Bst1-004) 43837272-43842242 processed_transcript
ENSMUST00000126976 (Bst1-003) 43818886-43825404 processed_transcript
ENSMUSG00000039753 (Fbxl5)
F-box and leucine-rich repeat protein 5 		ENSMUST00000047857 (Fbxl5-001) 43744616-43782149 protein_coding
ENSMUST00000087465 (Fbxl5-005) 43755906-43782121 protein_coding
ENSMUST00000114047 (Fbxl5-002) 43744624-43821639 protein_coding
ENSMUST00000119523 (Fbxl5-003) 43744616-43782118 protein_coding
ENSMUST00000121736 (Fbxl5-006) 43757886-43782137 protein_coding
ENSMUST00000124421 (Fbxl5-007) 43762312-43782118 retained_intron
ENSMUST00000124610 (Fbxl5-010) 43750673-43758413 protein_coding
ENSMUST00000140469 (Fbxl5-009) 43758764-43761113 retained_intron
ENSMUST00000141902 (Fbxl5-004) 43744616-43773600 protein_coding
ENSMUST00000143316 (Fbxl5-008) 43761032-43782102 retained_intron
ENSMUSG00000039765 (Cc2d2a)
coiled-coil and C2 domain containing 2A 		ENSMUST00000048150 (Cc2d2a-001) 43662379-43740972 protein_coding
ENSMUST00000125866 (Cc2d2a-005) 43689031-43740972 protein_coding
ENSMUST00000127355 (Cc2d2a-003) 43696582-43717017 retained_intron
ENSMUST00000142303 (Cc2d2a-004) 43672289-43689101 processed_transcript
ENSMUST00000156034 (Cc2d2a-002) 43672289-43703929 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026J_0001ENSG00000048342ENST00000389652ENST00000424120ENST00000503292ENST00000506643ENST00000511544ENST00000512202ENST00000512702ENST00000513811ENST00000514450ENST00000515124ENSG00000118564ENST00000341285ENST00000412094ENST00000507700ENST00000513163ENSG00000273133ENST00000609724CIL_00026J_0002ENSMUSG00000029082ENSMUST00000101237ENSMUSG00000039753ENSMUST00000047857ENSMUST00000114047ENSMUST00000121736ENSMUST00000141902ENSMUSG00000039765ENSMUST00000048150ENSMUST00000125866ENSMUST00000127355ENSMUST00000142303ENSMUST00000156034
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000048342 ENST00000389652 0.504±0.00 0.944±0.00 N/A 0.712±0.00 0.777±0.19 0.808±0.00 N/A 0.599±0.00 1.773±0.00 N/A N/A 0.796±0.30 0.905±0.00 1.100±0.06
ENST00000424120 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.655±0.00 N/A 0.395±0.00 1.228±0.00 0.393±0.00
ENST00000438599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503292 N/A N/A 0.426±0.00 0.539±0.00 0.479±0.00 1.045±0.65 0.381±0.00 0.820±0.00 N/A 0.635±0.00 N/A 2.292±0.00 N/A 0.535±0.00
ENST00000503658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506643 0.229±0.00 1.907±0.00 1.024±0.00 0.365±0.00 1.944±0.00 0.563±0.00 0.393±0.07 N/A 0.893±0.62 1.082±0.21 0.083±0.00 1.109±0.34 N/A 1.546±0.00
ENST00000507954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511544 N/A N/A N/A 0.533±0.00 N/A 0.663±0.00 N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A
ENST00000512202 N/A N/A N/A N/A N/A 3.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512702 N/A N/A 2.010±0.00 0.687±0.02 0.631±0.00 N/A 0.522±0.00 N/A 1.995±0.00 2.453±0.00 N/A 0.552±0.00 N/A N/A
ENST00000513035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513811 N/A N/A 0.767±0.00 0.258±0.00 0.739±0.00 0.939±0.00 0.456±0.00 N/A 1.193±1.07 N/A 0.370±0.00 0.631±0.00 0.701±0.00 N/A
ENST00000514039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514450 N/A N/A N/A N/A N/A 3.315±0.00 N/A N/A N/A N/A 0.383±0.00 N/A N/A N/A
ENST00000515124 0.768±0.00 N/A 1.025±0.00 1.452±0.00 1.646±0.00 4.243±0.00 0.686±0.31 2.436±0.00 0.162±0.00 2.145±0.00 0.167±0.00 1.818±0.79 3.137±0.56 1.545±0.00
ENSG00000118564 ENST00000341285 6.808±0.00 6.891±0.00 6.425±0.00 9.827±1.55 10.293±4.46 4.216±0.00 5.387±1.59 7.347±0.00 5.476±3.32 5.992±0.90 4.307±0.00 16.001±4.50 6.887±0.75 12.034±0.00
ENST00000412094 16.819±0.00 6.959±0.00 12.022±0.00 12.600±3.10 19.664±12.50 13.759±1.13 12.665±4.19 15.541±6.56 7.943±2.50 11.168±1.94 5.921±0.97 13.382±4.26 13.489±8.97 42.892±18.31
ENST00000503196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507700 N/A N/A N/A N/A 6.391±0.00 N/A N/A N/A 6.210±0.00 8.191±0.00 N/A 5.688±0.00 N/A N/A
ENST00000507899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513163 18.285±0.00 13.887±0.00 N/A 14.095±0.00 20.528±0.00 7.331±0.00 10.179±0.00 23.263±0.00 8.648±0.00 15.773±0.00 15.333±0.00 22.063±0.00 10.440±0.57 21.560±0.00
ENST00000514541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273133 ENST00000609724 N/A N/A N/A 0.298±0.00 2.111±0.00 1.129±0.00 0.225±0.00 N/A 0.892±0.80 3.991±0.00 N/A 0.713±0.57 0.156±0.06 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029082 ENSMUST00000101237 N/A N/A N/A N/A 7.519±3.62 N/A N/A 9.025±0.93 3.315±0.06 11.060±2.14 N/A N/A 11.104±0.49 N/A
ENSMUST00000118126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039753 ENSMUST00000047857 18.199±2.00 32.154±4.08 19.173±1.94 16.753±2.48 17.311±3.45 18.654±2.29 9.207±2.04 19.314±3.38 11.808±3.30 23.689±3.00 10.498±2.28 16.860±5.88 19.765±5.01 27.516±0.29
ENSMUST00000087465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.240±2.84 6.804±0.71 N/A
ENSMUST00000119523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.102±0.00
ENSMUST00000124421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141902 9.427±0.85 N/A N/A N/A 5.622±1.83 N/A 3.876±0.46 N/A 2.345±0.04 5.235±0.18 N/A 7.842±2.10 N/A 7.319±0.00
ENSMUST00000143316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039765 ENSMUST00000048150 0.708±0.08 0.580±0.13 N/A 1.031±0.00 0.653±0.11 0.434±0.00 N/A 0.572±0.01 0.159±0.00 N/A 0.391±0.08 1.480±0.76 0.214±0.06 0.143±0.00
ENSMUST00000125866 1.506±0.78 1.433±0.44 3.436±0.67 1.827±0.07 1.288±0.81 0.698±0.09 1.160±0.52 1.002±0.32 0.661±0.49 1.855±0.84 0.603±0.15 4.708±4.07 0.612±0.40 0.259±0.11
ENSMUST00000127355 N/A 0.515±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142303 N/A 1.221±0.27 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.484±0.00 N/A
ENSMUST00000156034 1.271±0.00 N/A N/A 2.616±0.00 0.987±0.00 0.918±0.01 N/A N/A N/A N/A N/A 21.572±0.00 0.605±0.23 0.698±0.00

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