C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyltransferase like 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557550 METTL17-008 ENSG00000165792 9606 + 14:20990003-20997016 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000557550
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000557550 2.132±0.00 1.974±0.60 3.466±0.00 4.103±0.00 2.830±1.96 5.751±0.00 2.014±0.13 4.205±0.00 2.700±0.00 3.601±0.76 3.445±1.04 4.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EJ CIL_0004EJ_0001 CGP 14:20955452-20997035
CIL_0004F1 CIL_0004F1_0001 CGP 14:20989770-21001871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 IEA copper ion binding
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047899 Mettl17-001 protein_coding Mus_musculus 0 1046
ENSMUST00000164902 Mettl17-007 protein_coding Mus_musculus 0 907
ENSMUST00000165568 Mettl17-014 protein_coding Mus_musculus 0 651
ENSMUST00000166408 Mettl17-006 retained_intron Mus_musculus 0 627
ENSMUST00000168413 Mettl17-004 retained_intron Mus_musculus 0 623
ENSMUST00000163603 Mettl17-003 retained_intron Mus_musculus 0 590
ENSMUST00000165100 Mettl17-002 nonsense_mediated_decay Mus_musculus 0 590
ENSMUST00000164252 Mettl17-008 nonsense_mediated_decay Mus_musculus 0 564
ENSMUST00000169019 Mettl17-005 retained_intron Mus_musculus 0 425

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