C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine-like receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047936 Cmklr1-001 ENSMUSG00000042190 10090 - 5:113612354-113650426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047936 24.907±15.87 3.878±2.09 2.743±0.27 0.466±0.07 13.362±6.42 1.593±0.61 1.781±0.57 1.278±0.08 0.574±0.12 27.587±12.45 0.999±0.33 4.623±1.36 4.732±3.79 9.602±2.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M9 CIL_0001M9_0002 CGP 5:113490333-113650426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004950 IEA chemokine receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006935 IEA chemotaxis
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0010759 IEA positive regulation of macrophage chemotaxis
GO:0016021 IEA integral component of membrane
GO:0032088 ISS negative regulation of NF-kappaB transcription factor activity
GO:0032695 IMP negative regulation of interleukin-12 production
GO:0045600 IMP positive regulation of fat cell differentiation
GO:0050848 IEA regulation of calcium-mediated signaling
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312143 CMKLR1-001 protein_coding Homo_sapiens 0 1003
ENST00000412676 CMKLR1-201 protein_coding Homo_sapiens 0 1003
ENST00000550402 CMKLR1-002 protein_coding Homo_sapiens 0 1003
ENST00000552995 CMKLR1-005 protein_coding Homo_sapiens 0 1003

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