C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372530 ABCC10-002 ENSG00000124574 9606 + 6:43427554-43450430 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000372530
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000372530 0.472±0.00 1.678±0.00 0.378±0.14 0.613±0.00 0.782±0.00 0.334±0.00 1.138±0.00 1.753±0.00 4.198±1.78 3.437±0.57 2.082±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005765 IDA lysosomal membrane
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA:TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167360 Abcc10-001 protein_coding Mus_musculus 0 4582
ENSMUST00000095261 Abcc10-005 protein_coding Mus_musculus 0 4385
ENSMUST00000047970 Abcc10-002 protein_coding Mus_musculus 0 4180
ENSMUST00000165733 Abcc10-004 retained_intron Mus_musculus 0 1437
ENSMUST00000171584 Abcc10-003 nonsense_mediated_decay Mus_musculus 0 1437
ENSMUST00000168490 Abcc10-007 protein_coding Mus_musculus 0 643

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