C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dermatan sulfate epimerase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048010 Dse-201 ENSMUSG00000039497 10090 - 10:34151394-34207551 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048010 5.937±2.25 3.061±0.33 5.423±1.41 1.056±0.35 10.828±3.03 2.264±0.38 1.631±0.11 2.506±0.56 2.192±0.66 5.069±1.18 0.541±0.12 7.272±1.35 5.067±1.50 0.369±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XK CIL_0005XK_0002 CGP 10:34151394-34285275

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0030208 IEA dermatan sulfate biosynthetic process
GO:0047757 IEA chondroitin-glucuronate 5-epimerase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331677 DSE-002 protein_coding Homo_sapiens 0 3382
ENST00000359564 DSE-201 protein_coding Homo_sapiens 0 3382
ENST00000430252 DSE-005 protein_coding Homo_sapiens 0 647
ENST00000436315 RP11-274B18.3-001 processed_pseudogene Homo_sapiens 0 2697
ENST00000452085 DSE-003 protein_coding Homo_sapiens 0 3373
ENST00000606712 DSE-006 retained_intron Homo_sapiens 0 2194
ENST00000607094 DSE-004 retained_intron Homo_sapiens 0 623

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