C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin, actin binding protein, 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048043 Coro2b-001 ENSMUSG00000041729 10090 - 9:62419492-62537044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048043
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048043 4.957±1.23 3.608±0.85 1.380±0.46 12.380±4.51 4.775±1.83 0.880±0.40 1.902±0.73 1.363±0.34 0.496±0.24 11.532±1.60 0.412±0.05 1.261±0.63 1.243±0.94 0.299±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FN CIL_0008FN_0002 VISTA 9:62114649-62715677
CIL_00080E CIL_00080E_0002 VISTA 9:62138578-62752434

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0015629 IBA actin cytoskeleton
GO:0016020 IEA membrane
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000084530 coro2ba-201 protein_coding Danio_rerio 0 896
ENSDART00000148590 coro2ba-001 protein_coding Danio_rerio 0 876
ENST00000261861 CORO2B-001 protein_coding Homo_sapiens 0 2001
ENST00000540068 CORO2B-201 protein_coding Homo_sapiens 0 1960
ENST00000543950 CORO2B-202 protein_coding Homo_sapiens 0 1960
ENST00000566799 CORO2B-203 protein_coding Homo_sapiens 0 2001

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