C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ABI family, member 3 (NESH) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284322 ABI3BP-001 ENSG00000154175 9606 - 3:100749335-100993515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284322
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284322 2.924±0.00 1.415±0.00 0.805±0.00 2.184±0.36 2.594±0.26 1.976±1.12 1.980±0.00 2.306±0.00 13.155±8.46 0.707±0.00 3.516±2.33 12.628±6.76 4.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022O CIL_00022O_0002 CGP 3:100709331-100993515

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005518 IEA collagen binding
GO:0005539 IEA glycosaminoglycan binding
GO:0005614 IEA interstitial matrix
GO:0005615 IDA extracellular space
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096012 Abi3bp-202 protein_coding Mus_musculus 0 1291
ENSMUST00000096013 Abi3bp-203 protein_coding Mus_musculus 0 1291
ENSMUST00000048471 Abi3bp-201 protein_coding Mus_musculus 0 1291
ENSMUST00000171000 Abi3bp-204 protein_coding Mus_musculus 0 1290
ENSDART00000089543 ABI3BP (1 of 2)-201 protein_coding Danio_rerio 3e-34 152
ENSDART00000133746 ABI3BP (1 of 2)-001 protein_coding Danio_rerio 1e-33 150

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