C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048490 Larp1b-204 ENSMUSG00000037814 10090 + 3:40950631-40977793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048490 4.721±1.35 1.790±0.35 5.226±0.35 1.496±0.82 5.494±2.67 4.076±1.15 7.844±0.88 5.874±1.02 9.718±3.07 2.505±0.98 14.624±2.25 3.394±1.48 3.940±1.44 79.416±37.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0002 VISTA 3:40857758-41459600

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326639 LARP1B-001 protein_coding Homo_sapiens 0 1253
ENST00000394288 LARP1B-003 protein_coding Homo_sapiens 0 1698
ENST00000432347 LARP1B-004 protein_coding Homo_sapiens 0 1253
ENST00000506036 LARP1BP1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000507377 LARP1B-006 protein_coding Homo_sapiens 0 1051
ENST00000508819 LARP1B-002 protein_coding Homo_sapiens 0 754
ENST00000512292 LARP1B-005 protein_coding Homo_sapiens 0 1253

Loading