C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: La ribonucleoprotein domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000326639 LARP1B-001 ENSG00000138709 9606 + 4:128061268-128211988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000326639
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000326639 0.356±0.00 2.218±0.00 0.741±0.04 0.611±0.00 0.403±0.00 2.728±1.26 2.847±0.00 0.759±0.00 0.585±0.25 10.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0001 VISTA 4:128057618-128659090
CIL_0006YL CIL_0006YL_0002 CGP 4:128061268-128288829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048490 Larp1b-204 protein_coding Mus_musculus 0 1253
ENSMUST00000099121 Larp1b-203 protein_coding Mus_musculus 0 828
ENSMUST00000065411 Larp1b-202 protein_coding Mus_musculus 0 394
ENSMUST00000026862 Larp1b-201 protein_coding Mus_musculus 0 211

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