C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAP associated domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048702 Papd4-201 ENSMUSG00000042167 10090 - 13:93147400-93192283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048702 5.897±2.71 12.290±2.14 16.665±1.66 9.610±2.95 11.464±4.12 9.320±1.99 3.499±0.66 5.523±2.04 13.487±10.18 9.033±3.56 1.664±0.68 10.782±3.41 22.626±5.54 3.902±1.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0004652 IEA polynucleotide adenylyltransferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0043631 IEA RNA polyadenylation
GO:0046872 IEA metal ion binding
GO:0071044 ISS histone mRNA catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296783 PAPD4-001 protein_coding Homo_sapiens 0 2265
ENST00000423041 PAPD4-007 protein_coding Homo_sapiens 0 2193
ENST00000428308 PAPD4-201 protein_coding Homo_sapiens 0 2263
ENST00000453514 PAPD4-202 protein_coding Homo_sapiens 0 2265
ENST00000503620 PAPD4-013 processed_transcript Homo_sapiens 0 438
ENST00000504233 PAPD4-002 protein_coding Homo_sapiens 0 1247
ENST00000504982 PAPD4-015 processed_transcript Homo_sapiens 0 206
ENST00000505571 PAPD4-006 retained_intron Homo_sapiens 0 658
ENST00000505770 PAPD4-005 retained_intron Homo_sapiens 0 255
ENST00000508620 PAPD4-014 processed_transcript Homo_sapiens 0 202
ENST00000509227 PAPD4-003 retained_intron Homo_sapiens 2e-38 163
ENST00000510721 PAPD4-004 retained_intron Homo_sapiens 0 488
ENST00000513735 PAPD4-016 processed_transcript Homo_sapiens 0 595
ENST00000514095 PAPD4-011 processed_transcript Homo_sapiens 0 357
ENST00000515298 PAPD4-012 retained_intron Homo_sapiens 0 562
ENST00000515807 PAPD4-009 processed_transcript Homo_sapiens 0 425

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