C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAP associated domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423041 PAPD4-007 ENSG00000164329 9606 + 5:79612433-79686648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyOvaryPlacentaTestisENST00000423041
Transcript ID Adipose Adrenal Breast Colon Kidney Ovary Placenta Testis
ENST00000423041 1.603±0.00 1.775±0.00 1.729±0.00 0.702±0.00 1.304±0.00 1.568±0.15 1.776±0.77 4.458±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077D CIL_00077D_0003 CGP 5:79612120-79800240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004652 IDA polynucleotide adenylyltransferase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0031380 IC nuclear RNA-directed RNA polymerase complex
GO:0043631 IDA RNA polyadenylation
GO:0046872 IEA metal ion binding
GO:0071044 IMP histone mRNA catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048702 Papd4-201 protein_coding Mus_musculus 0 2193
ENSMUST00000122385 Gm15975-001 processed_pseudogene Mus_musculus 0 1568
ENSMUST00000186523 RP23-361M12.1-001 processed_pseudogene Mus_musculus 0 472

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