C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myotubularin related protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048898 Mtmr7-001 ENSMUSG00000039431 10090 - 8:40551101-40634776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastPlacentaENSMUST00000048898
Transcript ID Brain Breast Placenta
ENSMUST00000048898 8.072±1.73 4.214±0.61 6.959±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T6 CIL_0001T6_0002 CGP 8:40492540-40551134
CIL_00006T CIL_00006T_0003 CGP 8:40511783-40634797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0016020 IDA membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0046855 IDA inositol phosphate dephosphorylation
GO:0046856 IDA phosphatidylinositol dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000180173 MTMR7-001 protein_coding Homo_sapiens 0 2543
ENST00000517317 MTMR7-006 nonsense_mediated_decay Homo_sapiens 0 571
ENST00000518272 MTMR7-005 processed_transcript Homo_sapiens 0 326
ENST00000519122 MTMR7-008 processed_transcript Homo_sapiens 0 521
ENST00000519590 MTMR7-003 retained_intron Homo_sapiens 0 505
ENST00000519763 MTMR7-009 processed_transcript Homo_sapiens 0 601
ENST00000520997 VPS37A-010 processed_transcript Homo_sapiens 0 411
ENST00000521162 VPS37A-009 processed_transcript Homo_sapiens 0 300
ENST00000521177 MTMR7-007 retained_intron Homo_sapiens 0 257
ENST00000521857 MTMR7-002 protein_coding Homo_sapiens 0 2087

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